Click here to switch to the map view.

The map label for this gene is spoIIIAF [H]

Identifier: 226949188

GI number: 226949188

Start: 2163275

End: 2163865

Strand: Reverse

Name: spoIIIAF [H]

Synonym: CLM_2107

Alternate gene names: 226949188

Gene position: 2163865-2163275 (Counterclockwise)

Preceding gene: 226949189

Following gene: 226949187

Centisome position: 52.08

GC content: 24.7

Gene sequence:

>591_bases
TTGCTCCAATGGTTAAAAGAGTGGATAACTAATATAGCTGTAGCAGTATTTTTTATAACTGCCATAGAGATGCTTTTACC
CAAAAATAATATAAAAAAGTACGGAAAATTTGTTCTTGGATTAATATTAATAACTGTAATATTAAATCCAATAATAAAAA
TATTTAATAAAGATTATAATATATCACAGTATGTAGAGAAGGCTACAGCTTCCTTTAATAATGTAGACTATAAAAATGAT
TTTGATAAATACAAAAAAAAGAATAGAGAGGAAACTTTAAATAACTTTAAAGCTAATCTTCAAAATCAAACTAAAAAAAG
GTTAGAAGAAAAGTTTCCAGAAAACAAATATGAGGTAAATGTAGAAATTGCTTATGATGAAGAAAAGGATAATTTGGAAA
TAAAATCTATGGATGTAGGAGTAAAGGGGAATAAAATAGAAAAAATCAAAAAAGTAAACAAAATAAATATAGGCAGCAAT
GAAAATGGAAAAGAGGATAAAAAGAGCTTTGAAGGAGAAGGTAAGATAAAACAGTTTATAAGCAATGAATTTAAGGTATC
CTCTGAAGTAATAAAAGTATATAAATTATAA

Upstream 100 bases:

>100_bases
CTGTAATGTTTTTTATAATGATAGCTATAATGGCTTCTGCAGGAAAGGTTTTTATGGGCACATAATTTAAAATATAACTT
TATAAAGGGGTGATTATATT

Downstream 100 bases:

>100_bases
TGGCGATTTGATTATATTGAATTTAAAATAAAATACAAATATGTATTTAAAAAAGTATATTATATATTTAAAAATAAACT
TAGCTTAAAATAATAATCTA

Product: stage III sporulation protein AF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLQWLKEWITNIAVAVFFITAIEMLLPKNNIKKYGKFVLGLILITVILNPIIKIFNKDYNISQYVEKATASFNNVDYKND
FDKYKKKNREETLNNFKANLQNQTKKRLEEKFPENKYEVNVEIAYDEEKDNLEIKSMDVGVKGNKIEKIKKVNKINIGSN
ENGKEDKKSFEGEGKIKQFISNEFKVSSEVIKVYKL

Sequences:

>Translated_196_residues
MLQWLKEWITNIAVAVFFITAIEMLLPKNNIKKYGKFVLGLILITVILNPIIKIFNKDYNISQYVEKATASFNNVDYKND
FDKYKKKNREETLNNFKANLQNQTKKRLEEKFPENKYEVNVEIAYDEEKDNLEIKSMDVGVKGNKIEKIKKVNKINIGSN
ENGKEDKKSFEGEGKIKQFISNEFKVSSEVIKVYKL
>Mature_196_residues
MLQWLKEWITNIAVAVFFITAIEMLLPKNNIKKYGKFVLGLILITVILNPIIKIFNKDYNISQYVEKATASFNNVDYKND
FDKYKKKNREETLNNFKANLQNQTKKRLEEKFPENKYEVNVEIAYDEEKDNLEIKSMDVGVKGNKIEKIKKVNKINIGSN
ENGKEDKKSFEGEGKIKQFISNEFKVSSEVIKVYKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014245 [H]

Pfam domain/function: PF09581 Spore_III_AF [H]

EC number: NA

Molecular weight: Translated: 22931; Mature: 22931

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQWLKEWITNIAVAVFFITAIEMLLPKNNIKKYGKFVLGLILITVILNPIIKIFNKDYN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ISQYVEKATASFNNVDYKNDFDKYKKKNREETLNNFKANLQNQTKKRLEEKFPENKYEVN
HHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
VEIAYDEEKDNLEIKSMDVGVKGNKIEKIKKVNKINIGSNENGKEDKKSFEGEGKIKQFI
EEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHH
SNEFKVSSEVIKVYKL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQWLKEWITNIAVAVFFITAIEMLLPKNNIKKYGKFVLGLILITVILNPIIKIFNKDYN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ISQYVEKATASFNNVDYKNDFDKYKKKNREETLNNFKANLQNQTKKRLEEKFPENKYEVN
HHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
VEIAYDEEKDNLEIKSMDVGVKGNKIEKIKKVNKINIGSNENGKEDKKSFEGEGKIKQFI
EEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHH
SNEFKVSSEVIKVYKL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]