Click here to switch to the map view.

The map label for this gene is 226949180

Identifier: 226949180

GI number: 226949180

Start: 2156925

End: 2157494

Strand: Reverse

Name: 226949180

Synonym: CLM_2099

Alternate gene names: NA

Gene position: 2157494-2156925 (Counterclockwise)

Preceding gene: 226949181

Following gene: 226949179

Centisome position: 51.92

GC content: 28.77

Gene sequence:

>570_bases
TTGGGAAATAAAAAAGATAATAAAAAAGATAATAAGAAGAGTGACTCCAAGGTCAATGTAAAATGGGTCTTAACCATTGT
TACATGGTCTGTTATTTTTTCAGGGAGTATATCTCTTGTTTCAGATGTGCTACTAGATAATGTAAACTTATTAGTAGCTT
TTATTATATTAATTTTTATTATATTAATTGGTATAATATTTGATATAATAGGAGTTGCAGTAACTGCATCCAATGAAACA
CCTTTTCATGCAAAAGCTGCTAATAAAGTACCAGGAGCAAAACTCGCAGTAACTTTTATTAGAAATGCAGAAAAGGTATC
AAGTTTTTGCAATGATGTTATAGGAGACGTCTGTGGTATTGTAAGTGGTTCTATAGGGATAATAATAGGAAATAAGATAT
TATCCTTAAATTCTACTTTAAATTCTACAGTAGTAGCTACAATTATAGGTGTTACCATAGGAGCTTTAACTATAGGGGGA
AAAGCTTTAGGTAAAGGATTTGCTATAACAAATAGTAATGATATATTAGAAAAGGTTACAAGAATAATATATTTTTTTAA
AAGAGGATAG

Upstream 100 bases:

>100_bases
CAAGGTTTACTCAATACACTACCACCTTTTAAAATTACATATTGAAATGTATAATTTATAAAGTGATTCTTAATACTTAG
TTTTCATGGAGGAATTATAA

Downstream 100 bases:

>100_bases
ATGAAAATGAAAAACATATTAGATAAATATCAAGATTTTGATAGTATAAAATCCATGTCTATAAATGAGTTAAACCAATT
CTCTTACGAGATAAGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MGNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFIILIGIIFDIIGVAVTASNET
PFHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGIVSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGG
KALGKGFAITNSNDILEKVTRIIYFFKRG

Sequences:

>Translated_189_residues
MGNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFIILIGIIFDIIGVAVTASNET
PFHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGIVSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGG
KALGKGFAITNSNDILEKVTRIIYFFKRG
>Mature_188_residues
GNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFIILIGIIFDIIGVAVTASNETP
FHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGIVSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGGK
ALGKGFAITNSNDILEKVTRIIYFFKRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20038; Mature: 19907

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFI
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
ILIGIIFDIIGVAVTASNETPFHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGI
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHH
VSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGGKALGKGFAITNSNDILEKVT
HCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCHHHHHHHH
RIIYFFKRG
HHHHHHCCC
>Mature Secondary Structure 
GNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFI
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
ILIGIIFDIIGVAVTASNETPFHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGI
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHH
VSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGGKALGKGFAITNSNDILEKVT
HCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCHHHHHHHH
RIIYFFKRG
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA