Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 226949175

GI number: 226949175

Start: 2151198

End: 2152901

Strand: Reverse

Name: recN [H]

Synonym: CLM_2094

Alternate gene names: 226949175

Gene position: 2152901-2151198 (Counterclockwise)

Preceding gene: 226949176

Following gene: 226949174

Centisome position: 51.81

GC content: 27.35

Gene sequence:

>1704_bases
ATGCTCCTTCAACTTAATATAAAGAATTTTGCACTTATAGAAGAATTGTCTATATCCTTTGATAAAGGATTTAATGTCCT
TACAGGTGAAACTGGAGCTGGTAAATCTATTCTTATAGATGCTATAAGTTATGTTCTAGGTGGTAAATTCAACAGAGATC
TTATAAGAACTGGAGAAAATAAAACCTATGTGGAAGCAATATTTTCTATTGAGAATGAAAGTACAGAGAGAATATTAAAA
AATCAAGGGATAGATTTTGAGGATATATTAATAATAGGAAGAGAAACCTTTCAATATGGTAAAAGTATAGCTAAAGTAAA
TGGAAAAAGTGTTTTATTAGCTAATTTAAAGGAAATAACAAGCACTTTATTAGATATTCACGGACAACATGAAAATCAAA
ATCTTTTAAGCTGTGAGAATCATATAAATTATTTAGATTATTTTAGTGAAAAAGAATTATATTCTATTATGGAAAAATAT
AAGGGTGAGTATTTAAATCTTTTAAATATAGAAAATAAAATAAAAGAGATATCCGGTGGAGATGAAAGTGAAAGAGAAAA
GTTAATGGACTTTTTAAAATATCAAATTAAAGAAATAGGAGAGACTAATTTAAAAGAGGGAGAAGAAGAAGAATTAGATA
ATAAATTTTTAGAACTTTCAAACGCAGAAAAAATTAGTAAAGTTTTAAATAATAGCTATGGAATATTATATGGGGGATTA
GAAGAGGAGTCCTCGGCCTTTGATAGTTTAGGATATGTTATAAGAGAAATGGAGTCTATTAATAGCATAGATAAGGTTAC
CTCTATATGCCAAAGTTTAAAGGATGCTTATTATATAATAGAGGAGTCCATAAGAAATATAGGAGATATAAAAGATAACA
TATATTATGATGAGAATGAATTAGATCGCATAAATAGTAGACTTTTTCAAATATCTACTCTTAAGAAAAAGTATGGCACA
ACCATAAAAGAGATTATAGAATATAAAGATAAAATAGAAAAACAATATGAGGATATGATAAACTCAGAAGAAATAATAGA
AAAATTGAGCAATGATAGAAAAAGAGTATTAAATAATTTAAAAGAAATAGCCATGCAAATGCATAATATAAGAGTTAGGT
ACGCAGAAGAATTAGAAGTAAGGGTTAAAGAAGAATTAAGTTATGTAGGACTTTCCAAAACTAGATTTAAAATTAATGTA
GATCTAGTATCTAGTTTTTTTAAAAGCGGCTGTGATAAAGTAGAATTTTATGTATCTACTAATCCAGGAGAGCCTTTAAA
ACATTTAGATAAAGTAGTGTCTGGAGGAGAGCTTTCACGAATAATGCTAGCTTTAAAAACTGTATTTGTAGATAAGGATA
AAATACCTTCAGTTATATTTGATGAAATAGATACAGGTATAAGTGGAGTAGTGGCACAAAGTGTAGGAGAGAAGATGTAC
TCTATATCTGATGGTCGTCAAGTATTTTGTATAACACATTTATCACAAATAGCTTGTATGTCTGATAATCATTATTATAT
ACATAAAGAAGTATTACAGGACAAAACCTATACAAAGGTTACAAAATTGAGTGAAGAAGATAAAGAAATAGAAATAGGAA
GAATGATAGGGGGATCAAATCTTACAGATATAACCCTTCAAAATGCAAAGGAAATAATAAAAATAGCGGACAATAAAAAA
GAAGAAATATTAAAAAATTCCTAA

Upstream 100 bases:

>100_bases
AGGTGATAATACTATATTTGCTATGACAAGAACTAATGAGAAAGCTCAAGAGATAACTCTAAAATTAAAAAAGATTATTA
ATGCATAAGGGGGATTTCAA

Downstream 100 bases:

>100_bases
AATGGTATTGACAAAATAATAGATAAGGTTATAATAAATTCTAAAGATGTTTAAAATTAAATAAAAAGCTCTTATCAAGA
GTGGCGGAGGGATCAGGCCC

Product: DNA repair protein recN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MLLQLNIKNFALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDLIRTGENKTYVEAIFSIENESTERILK
NQGIDFEDILIIGRETFQYGKSIAKVNGKSVLLANLKEITSTLLDIHGQHENQNLLSCENHINYLDYFSEKELYSIMEKY
KGEYLNLLNIENKIKEISGGDESEREKLMDFLKYQIKEIGETNLKEGEEEELDNKFLELSNAEKISKVLNNSYGILYGGL
EEESSAFDSLGYVIREMESINSIDKVTSICQSLKDAYYIIEESIRNIGDIKDNIYYDENELDRINSRLFQISTLKKKYGT
TIKEIIEYKDKIEKQYEDMINSEEIIEKLSNDRKRVLNNLKEIAMQMHNIRVRYAEELEVRVKEELSYVGLSKTRFKINV
DLVSSFFKSGCDKVEFYVSTNPGEPLKHLDKVVSGGELSRIMLALKTVFVDKDKIPSVIFDEIDTGISGVVAQSVGEKMY
SISDGRQVFCITHLSQIACMSDNHYYIHKEVLQDKTYTKVTKLSEEDKEIEIGRMIGGSNLTDITLQNAKEIIKIADNKK
EEILKNS

Sequences:

>Translated_567_residues
MLLQLNIKNFALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDLIRTGENKTYVEAIFSIENESTERILK
NQGIDFEDILIIGRETFQYGKSIAKVNGKSVLLANLKEITSTLLDIHGQHENQNLLSCENHINYLDYFSEKELYSIMEKY
KGEYLNLLNIENKIKEISGGDESEREKLMDFLKYQIKEIGETNLKEGEEEELDNKFLELSNAEKISKVLNNSYGILYGGL
EEESSAFDSLGYVIREMESINSIDKVTSICQSLKDAYYIIEESIRNIGDIKDNIYYDENELDRINSRLFQISTLKKKYGT
TIKEIIEYKDKIEKQYEDMINSEEIIEKLSNDRKRVLNNLKEIAMQMHNIRVRYAEELEVRVKEELSYVGLSKTRFKINV
DLVSSFFKSGCDKVEFYVSTNPGEPLKHLDKVVSGGELSRIMLALKTVFVDKDKIPSVIFDEIDTGISGVVAQSVGEKMY
SISDGRQVFCITHLSQIACMSDNHYYIHKEVLQDKTYTKVTKLSEEDKEIEIGRMIGGSNLTDITLQNAKEIIKIADNKK
EEILKNS
>Mature_567_residues
MLLQLNIKNFALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDLIRTGENKTYVEAIFSIENESTERILK
NQGIDFEDILIIGRETFQYGKSIAKVNGKSVLLANLKEITSTLLDIHGQHENQNLLSCENHINYLDYFSEKELYSIMEKY
KGEYLNLLNIENKIKEISGGDESEREKLMDFLKYQIKEIGETNLKEGEEEELDNKFLELSNAEKISKVLNNSYGILYGGL
EEESSAFDSLGYVIREMESINSIDKVTSICQSLKDAYYIIEESIRNIGDIKDNIYYDENELDRINSRLFQISTLKKKYGT
TIKEIIEYKDKIEKQYEDMINSEEIIEKLSNDRKRVLNNLKEIAMQMHNIRVRYAEELEVRVKEELSYVGLSKTRFKINV
DLVSSFFKSGCDKVEFYVSTNPGEPLKHLDKVVSGGELSRIMLALKTVFVDKDKIPSVIFDEIDTGISGVVAQSVGEKMY
SISDGRQVFCITHLSQIACMSDNHYYIHKEVLQDKTYTKVTKLSEEDKEIEIGRMIGGSNLTDITLQNAKEIIKIADNKK
EEILKNS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=563, Percent_Identity=32.1492007104796, Blast_Score=295, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 64879; Mature: 64879

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQLNIKNFALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDLIRTGEN
CEEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCC
KTYVEAIFSIENESTERILKNQGIDFEDILIIGRETFQYGKSIAKVNGKSVLLANLKEIT
HHHHHHHHHHCCHHHHHHHHHCCCCHHHEEEECHHHHHHCHHHHHCCCCCHHHHHHHHHH
STLLDIHGQHENQNLLSCENHINYLDYFSEKELYSIMEKYKGEYLNLLNIENKIKEISGG
HHHHHHCCCCCCCCHHHHHHHCHHHHHHCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCC
DESEREKLMDFLKYQIKEIGETNLKEGEEEELDNKFLELSNAEKISKVLNNSYGILYGGL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCC
EEESSAFDSLGYVIREMESINSIDKVTSICQSLKDAYYIIEESIRNIGDIKDNIYYDENE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEECCHH
LDRINSRLFQISTLKKKYGTTIKEIIEYKDKIEKQYEDMINSEEIIEKLSNDRKRVLNNL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH
KEIAMQMHNIRVRYAEELEVRVKEELSYVGLSKTRFKINVDLVSSFFKSGCDKVEFYVST
HHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCEEEEEEEC
NPGEPLKHLDKVVSGGELSRIMLALKTVFVDKDKIPSVIFDEIDTGISGVVAQSVGEKMY
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
SISDGRQVFCITHLSQIACMSDNHYYIHKEVLQDKTYTKVTKLSEEDKEIEIGRMIGGSN
CCCCCCEEEEEEHHHHHHEECCCCEEEEHHHHCCCHHHHHHHCCCCCCCEEEHHEECCCC
LTDITLQNAKEIIKIADNKKEEILKNS
CCCEEHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MLLQLNIKNFALIEELSISFDKGFNVLTGETGAGKSILIDAISYVLGGKFNRDLIRTGEN
CEEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCC
KTYVEAIFSIENESTERILKNQGIDFEDILIIGRETFQYGKSIAKVNGKSVLLANLKEIT
HHHHHHHHHHCCHHHHHHHHHCCCCHHHEEEECHHHHHHCHHHHHCCCCCHHHHHHHHHH
STLLDIHGQHENQNLLSCENHINYLDYFSEKELYSIMEKYKGEYLNLLNIENKIKEISGG
HHHHHHCCCCCCCCHHHHHHHCHHHHHHCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCC
DESEREKLMDFLKYQIKEIGETNLKEGEEEELDNKFLELSNAEKISKVLNNSYGILYGGL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCC
EEESSAFDSLGYVIREMESINSIDKVTSICQSLKDAYYIIEESIRNIGDIKDNIYYDENE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEECCHH
LDRINSRLFQISTLKKKYGTTIKEIIEYKDKIEKQYEDMINSEEIIEKLSNDRKRVLNNL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH
KEIAMQMHNIRVRYAEELEVRVKEELSYVGLSKTRFKINVDLVSSFFKSGCDKVEFYVST
HHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCEEEEEEEC
NPGEPLKHLDKVVSGGELSRIMLALKTVFVDKDKIPSVIFDEIDTGISGVVAQSVGEKMY
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
SISDGRQVFCITHLSQIACMSDNHYYIHKEVLQDKTYTKVTKLSEEDKEIEIGRMIGGSN
CCCCCCEEEEEEHHHHHHEECCCCEEEEHHHHCCCHHHHHHHCCCCCCCEEEHHEECCCC
LTDITLQNAKEIIKIADNKKEEILKNS
CCCEEHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]