| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949158
Identifier: 226949158
GI number: 226949158
Start: 2136388
End: 2137194
Strand: Reverse
Name: 226949158
Synonym: CLM_2076
Alternate gene names: NA
Gene position: 2137194-2136388 (Counterclockwise)
Preceding gene: 226949159
Following gene: 226949157
Centisome position: 51.43
GC content: 26.52
Gene sequence:
>807_bases ATGGCAAAGAAAACTTTATGTAAAGAATTAGATTTTAGAGGAGATTACAGTAACATATTTGGAAAAGCAATGAATTTTAT TTTTATTAATTGCTATACAGATGTAGGAGAATGTGAAGAAGTTAAAATTGAACAAAATAAAATATCTACAGAAGAAATAG ATTATATCAAATTAGAAAGAGAAATTGAAAAACATTTAATAAAGAATAAATTATTTATTGTTGGTGTTAAAAAAGAAGCT AATGCAGTTGTAATAGAAACAACTAAAAATGATATATATGATTTATTATTTGTCCCAGAATTTGATGAAGAAAATTATAA ATCTAATGAATTAGAAGAGATTAGACAAGAAATCAAAGAAGAAGATCCTACAGATGAAGAAATCATAAATAAAGAAAAAT ATGAGGAATTAATAAGTTTAGGGGAGGAGCTAATAAAGAAATGTTCTTCTTCAAATGATGATACAGCTGTTTGCATCAAA AAGGATGGAAGTATATATCATACTACAAATGATTCTACTAAGGAAATATATTATGGAGATGCTATTGTGGTTTATACGGT AGATAATACAACAACTATAGAAAATATTAGGCAACAAATTGAGCAAACAAGTAATATTACAAAAGAAGATTTTGTAACAG ACCAAGAACGAGATAAATTAATAGAAAAAGAGAATTATGAGTATGCACAAAAGTATGGAAAAATTTGTCCCAAATGTAGA AGTATAGTTACAAATTTAGCACCAAATGGGGCAGGTGTTATGGAAGAATGTAATTGGCATTGTGAAAAATGTGGATGGGA AGAATAA
Upstream 100 bases:
>100_bases CAGAAATAAAGGAATATGGACAAGCAGGTGAAGAAGAAATACCATTTTAAAAAATTTAATTACAAATATAAATCTAAAAT ATGAAAGGTGGAAATTAACT
Downstream 100 bases:
>100_bases TAAAACATAAATAAAGGACATTAGGGGAGTTATTCCTCTTTTGTTTATCTATATTAAGGAGGATATGAGTATGAAATATA TCAAAAGAACATCTAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAKKTLCKELDFRGDYSNIFGKAMNFIFINCYTDVGECEEVKIEQNKISTEEIDYIKLEREIEKHLIKNKLFIVGVKKEA NAVVIETTKNDIYDLLFVPEFDEENYKSNELEEIRQEIKEEDPTDEEIINKEKYEELISLGEELIKKCSSSNDDTAVCIK KDGSIYHTTNDSTKEIYYGDAIVVYTVDNTTTIENIRQQIEQTSNITKEDFVTDQERDKLIEKENYEYAQKYGKICPKCR SIVTNLAPNGAGVMEECNWHCEKCGWEE
Sequences:
>Translated_268_residues MAKKTLCKELDFRGDYSNIFGKAMNFIFINCYTDVGECEEVKIEQNKISTEEIDYIKLEREIEKHLIKNKLFIVGVKKEA NAVVIETTKNDIYDLLFVPEFDEENYKSNELEEIRQEIKEEDPTDEEIINKEKYEELISLGEELIKKCSSSNDDTAVCIK KDGSIYHTTNDSTKEIYYGDAIVVYTVDNTTTIENIRQQIEQTSNITKEDFVTDQERDKLIEKENYEYAQKYGKICPKCR SIVTNLAPNGAGVMEECNWHCEKCGWEE >Mature_267_residues AKKTLCKELDFRGDYSNIFGKAMNFIFINCYTDVGECEEVKIEQNKISTEEIDYIKLEREIEKHLIKNKLFIVGVKKEAN AVVIETTKNDIYDLLFVPEFDEENYKSNELEEIRQEIKEEDPTDEEIINKEKYEELISLGEELIKKCSSSNDDTAVCIKK DGSIYHTTNDSTKEIYYGDAIVVYTVDNTTTIENIRQQIEQTSNITKEDFVTDQERDKLIEKENYEYAQKYGKICPKCRS IVTNLAPNGAGVMEECNWHCEKCGWEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31184; Mature: 31053
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKTLCKELDFRGDYSNIFGKAMNFIFINCYTDVGECEEVKIEQNKISTEEIDYIKLER CCHHHHHHHCCCCCCHHHHHHHHHHEEEEEEECCCCCCHHEEEHHCCCCHHHHHHHHHHH EIEKHLIKNKLFIVGVKKEANAVVIETTKNDIYDLLFVPEFDEENYKSNELEEIRQEIKE HHHHHHHHCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH EDPTDEEIINKEKYEELISLGEELIKKCSSSNDDTAVCIKKDGSIYHTTNDSTKEIYYGD CCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCEEEECC AIVVYTVDNTTTIENIRQQIEQTSNITKEDFVTDQERDKLIEKENYEYAQKYGKICPKCR EEEEEECCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHCHHHH SIVTNLAPNGAGVMEECNWHCEKCGWEE HHHHHCCCCCCCHHHHCCCHHHCCCCCC >Mature Secondary Structure AKKTLCKELDFRGDYSNIFGKAMNFIFINCYTDVGECEEVKIEQNKISTEEIDYIKLER CHHHHHHHCCCCCCHHHHHHHHHHEEEEEEECCCCCCHHEEEHHCCCCHHHHHHHHHHH EIEKHLIKNKLFIVGVKKEANAVVIETTKNDIYDLLFVPEFDEENYKSNELEEIRQEIKE HHHHHHHHCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH EDPTDEEIINKEKYEELISLGEELIKKCSSSNDDTAVCIKKDGSIYHTTNDSTKEIYYGD CCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCEEEECC AIVVYTVDNTTTIENIRQQIEQTSNITKEDFVTDQERDKLIEKENYEYAQKYGKICPKCR EEEEEECCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHCHHHH SIVTNLAPNGAGVMEECNWHCEKCGWEE HHHHHCCCCCCCHHHHCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA