Click here to switch to the map view.

The map label for this gene is 226949157

Identifier: 226949157

GI number: 226949157

Start: 2135364

End: 2136317

Strand: Reverse

Name: 226949157

Synonym: CLM_2075

Alternate gene names: NA

Gene position: 2136317-2135364 (Counterclockwise)

Preceding gene: 226949158

Following gene: 226949156

Centisome position: 51.41

GC content: 22.75

Gene sequence:

>954_bases
ATGAAATATATCAAAAGAACATCTAAAAAAAATAGACAAGAACTATTAAATCAAGCTTTAAGGGAAGAATTAGAATTCTT
AAGAAAAAGGTGTTTTCCTTGGAAGAGAAGAGAATTTTTATTAGCTCCAGTAGAAATAAGAGAAAATAAATTTAATAATA
AAAATGATTTAACAACAGCAGGAAAATATCAGAAGATTAAAACAGGAAAGTATAAATATAAACATTTTATAGAGATTAGA
AAAAACATATTGATAAATTGTCAAAAGGTTCCTTTAGCTTATTATAGAAAAAATTCGTATAAGGAATTACGTTCTGTAAT
TAGACATGAATTGTGCCACGCTTTTATAGAAGAACGATATGAAAATATATTTAGTAATTTAGAAAATAAAAACTATGATG
CAAGTCCAATTTTTCTTACAGTTTTAAATTGGGTTTTTGGAAATAGTGGACATGATTGTTGTAAAAAATTTATACATACA
GATTATTCTTTTGAATCTAATTGTATAATAGATAGTTTTGAAGAATTAGATAATTATATATTTAAAATGTTAAAAGATTT
TAATGAAGTAACAGAAAAGTTAAAAGAACTTGGAAATAAAGAAGAATTTGTACAAGGTAAAACTAATAATTTATTTGTTA
TAACAAATAAATTCCATTTTAGTAGTAGAAAATGTGGATTCAATAAGTTTATAGAACATGATTGGGTAGATATTTTTAAA
AATAAAGATGACAAATATAGCAAAGTACATAACATTAATAGAACGTGGGAAATTGGTTGTAATGTAACTCCTGACAAATT
ATTACATTTATATAATCGCAAACAGAATTGTAAAGCACAGTATTATAGTAATAAAAAACAACTTGTAACGATCACAAATA
AAAATATGAATACAGAAAAAATTACAATTGATGATATGAAAACTATCATTTTAAAAGAAGAAAAGAATTTTTAA

Upstream 100 bases:

>100_bases
CATTGTGAAAAATGTGGATGGGAAGAATAATAAAACATAAATAAAGGACATTAGGGGAGTTATTCCTCTTTTGTTTATCT
ATATTAAGGAGGATATGAGT

Downstream 100 bases:

>100_bases
AAACAATACTAAAAAATCAAAAATATCGAAAGGAAGGTGTTTATGTGAATGTAAAAGATAAGAATTTTAAAGATTTAACA
GAAGAATGGACAGGTAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKYIKRTSKKNRQELLNQALREELEFLRKRCFPWKRREFLLAPVEIRENKFNNKNDLTTAGKYQKIKTGKYKYKHFIEIR
KNILINCQKVPLAYYRKNSYKELRSVIRHELCHAFIEERYENIFSNLENKNYDASPIFLTVLNWVFGNSGHDCCKKFIHT
DYSFESNCIIDSFEELDNYIFKMLKDFNEVTEKLKELGNKEEFVQGKTNNLFVITNKFHFSSRKCGFNKFIEHDWVDIFK
NKDDKYSKVHNINRTWEIGCNVTPDKLLHLYNRKQNCKAQYYSNKKQLVTITNKNMNTEKITIDDMKTIILKEEKNF

Sequences:

>Translated_317_residues
MKYIKRTSKKNRQELLNQALREELEFLRKRCFPWKRREFLLAPVEIRENKFNNKNDLTTAGKYQKIKTGKYKYKHFIEIR
KNILINCQKVPLAYYRKNSYKELRSVIRHELCHAFIEERYENIFSNLENKNYDASPIFLTVLNWVFGNSGHDCCKKFIHT
DYSFESNCIIDSFEELDNYIFKMLKDFNEVTEKLKELGNKEEFVQGKTNNLFVITNKFHFSSRKCGFNKFIEHDWVDIFK
NKDDKYSKVHNINRTWEIGCNVTPDKLLHLYNRKQNCKAQYYSNKKQLVTITNKNMNTEKITIDDMKTIILKEEKNF
>Mature_317_residues
MKYIKRTSKKNRQELLNQALREELEFLRKRCFPWKRREFLLAPVEIRENKFNNKNDLTTAGKYQKIKTGKYKYKHFIEIR
KNILINCQKVPLAYYRKNSYKELRSVIRHELCHAFIEERYENIFSNLENKNYDASPIFLTVLNWVFGNSGHDCCKKFIHT
DYSFESNCIIDSFEELDNYIFKMLKDFNEVTEKLKELGNKEEFVQGKTNNLFVITNKFHFSSRKCGFNKFIEHDWVDIFK
NKDDKYSKVHNINRTWEIGCNVTPDKLLHLYNRKQNCKAQYYSNKKQLVTITNKNMNTEKITIDDMKTIILKEEKNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38313; Mature: 38313

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIKRTSKKNRQELLNQALREELEFLRKRCFPWKRREFLLAPVEIRENKFNNKNDLTTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCC
GKYQKIKTGKYKYKHFIEIRKNILINCQKVPLAYYRKNSYKELRSVIRHELCHAFIEERY
CCCHHHCCCCHHHHHHHHHHHHHHEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ENIFSNLENKNYDASPIFLTVLNWVFGNSGHDCCKKFIHTDYSFESNCIIDSFEELDNYI
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
FKMLKDFNEVTEKLKELGNKEEFVQGKTNNLFVITNKFHFSSRKCGFNKFIEHDWVDIFK
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECEECCCCCCCHHHHHHHHHHHHHC
NKDDKYSKVHNINRTWEIGCNVTPDKLLHLYNRKQNCKAQYYSNKKQLVTITNKNMNTEK
CCCHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCCE
ITIDDMKTIILKEEKNF
EEHHHHHEEEEECCCCC
>Mature Secondary Structure
MKYIKRTSKKNRQELLNQALREELEFLRKRCFPWKRREFLLAPVEIRENKFNNKNDLTTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCC
GKYQKIKTGKYKYKHFIEIRKNILINCQKVPLAYYRKNSYKELRSVIRHELCHAFIEERY
CCCHHHCCCCHHHHHHHHHHHHHHEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ENIFSNLENKNYDASPIFLTVLNWVFGNSGHDCCKKFIHTDYSFESNCIIDSFEELDNYI
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
FKMLKDFNEVTEKLKELGNKEEFVQGKTNNLFVITNKFHFSSRKCGFNKFIEHDWVDIFK
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECEECCCCCCCHHHHHHHHHHHHHC
NKDDKYSKVHNINRTWEIGCNVTPDKLLHLYNRKQNCKAQYYSNKKQLVTITNKNMNTEK
CCCHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCCE
ITIDDMKTIILKEEKNF
EEHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA