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The map label for this gene is hypC [C]

Identifier: 226949076

GI number: 226949076

Start: 2056547

End: 2056774

Strand: Reverse

Name: hypC [C]

Synonym: CLM_1992

Alternate gene names: 226949076

Gene position: 2056774-2056547 (Counterclockwise)

Preceding gene: 226949077

Following gene: 226949075

Centisome position: 49.5

GC content: 30.7

Gene sequence:

>228_bases
ATGTGTATTGCAATACCAGGGAAAATTGTAAGTATTGATGGCCACTATGCTATAGCAAATACTATGGGTATAGAAAGTGA
AATAAATATAGCGCTTATAGAAAATCCATCTATCAATGACTATGTTCTAATTCATGCAGGTTGTGCTATAGAAAAAATAG
ACTATGAGTATTTTTCTTACTTAGAACAAACTATAAAAGAAGCCTTAAGGAGTAATACAGATGGATAA

Upstream 100 bases:

>100_bases
TTTAAAGTGTTTTTTAATGAAAAAGTTCCTATAAATGATGAAGGAATAAGCCTTGGTCAATTAACTATTGGTGACTCTAT
TATAGAAAGGGAGAAAATAA

Downstream 100 bases:

>100_bases
TTGTAAATTAATAGTTGAAATCATGGAGAAGATAAAAGCTATAGATACAAGTCCTTTGAAGATAATGGAAGTATGCGGTA
GTCATACGGAAGTTATAGAT

Product: hydrogenase assembly chaperone HypC/HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MCIAIPGKIVSIDGHYAIANTMGIESEINIALIENPSINDYVLIHAGCAIEKIDYEYFSYLEQTIKEALRSNTDG

Sequences:

>Translated_75_residues
MCIAIPGKIVSIDGHYAIANTMGIESEINIALIENPSINDYVLIHAGCAIEKIDYEYFSYLEQTIKEALRSNTDG
>Mature_75_residues
MCIAIPGKIVSIDGHYAIANTMGIESEINIALIENPSINDYVLIHAGCAIEKIDYEYFSYLEQTIKEALRSNTDG

Specific function: Is Required For The Formation Of All Three Hydrogenase Isoenzymes. May Bind To The Precursor Form Of The Large Subunit Of Dehydrogenases To Keep Them In A Conformation Accessible For Metal Incorporation. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8279; Mature: 8279

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIAIPGKIVSIDGHYAIANTMGIESEINIALIENPSINDYVLIHAGCAIEKIDYEYFSY
CEEECCCEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCEEEEECHHHHHH
LEQTIKEALRSNTDG
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MCIAIPGKIVSIDGHYAIANTMGIESEINIALIENPSINDYVLIHAGCAIEKIDYEYFSY
CEEECCCEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCEEEEECHHHHHH
LEQTIKEALRSNTDG
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA