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The map label for this gene is ftnA [H]

Identifier: 226949028

GI number: 226949028

Start: 2001961

End: 2002476

Strand: Reverse

Name: ftnA [H]

Synonym: CLM_1942

Alternate gene names: 226949028

Gene position: 2002476-2001961 (Counterclockwise)

Preceding gene: 226949031

Following gene: 226949021

Centisome position: 48.19

GC content: 28.49

Gene sequence:

>516_bases
ATGTTAAGTGAAAAACTATTAAAAGCTTTAAATAATCAAATAAACTTTGAATTTTATTCATCTTATATTTATTTAGCTAT
GGCCTCTTATGCTGAATCAGAGGATTTAGCTGGATTTGCTAATTTTTTTAGAGTTCAGGCTCAAGAAGAAATATTCCACG
CTATGAAATTTTATGATTATGTAAATCAAATGGGAGGAAGAGTAATACTTGAGAAAATAGATCAGCCTAAAGCTGAATAT
AAAAACATACTTGAATGCTTTGAAGATGGATTTAATCATGAAAAAATAGTCACAAGTAGAATTTATAATTTAACTGATAT
TGCTACAGAAGAAAAAGAACATGCTACCATAAGTCTTTTAAAATGGTTTATAGATGAACAAGTAGAAGAAGAAAATAATT
TTAATACTATAATAAGAAAATTAAGAAGAGCAGAATCTAATCCAGCAGTACTTTATATGCTCGATGATGAGTTGTCTGCA
AGAGTATTTACTCCACCAACAAACACTGGGGCTTAA

Upstream 100 bases:

>100_bases
AATATATAATTAGTATATAAGTTTAAAAATTACACATTATAGTAATAATTACTATTAGATATACCTTTAGTTACTAAATT
TATTTATAGGAGGAAATTTT

Downstream 100 bases:

>100_bases
TTTTTAATATAAAAAATCTGCTAGTAAGTTAAATTCTATATTCAATTTTAATTAAAATACTCCCTATTCACAATCTAGTT
GTGATAATAGGGAGTATTAA

Product: ferritin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLSEKLLKALNNQINFEFYSSYIYLAMASYAESEDLAGFANFFRVQAQEEIFHAMKFYDYVNQMGGRVILEKIDQPKAEY
KNILECFEDGFNHEKIVTSRIYNLTDIATEEKEHATISLLKWFIDEQVEEENNFNTIIRKLRRAESNPAVLYMLDDELSA
RVFTPPTNTGA

Sequences:

>Translated_171_residues
MLSEKLLKALNNQINFEFYSSYIYLAMASYAESEDLAGFANFFRVQAQEEIFHAMKFYDYVNQMGGRVILEKIDQPKAEY
KNILECFEDGFNHEKIVTSRIYNLTDIATEEKEHATISLLKWFIDEQVEEENNFNTIIRKLRRAESNPAVLYMLDDELSA
RVFTPPTNTGA
>Mature_171_residues
MLSEKLLKALNNQINFEFYSSYIYLAMASYAESEDLAGFANFFRVQAQEEIFHAMKFYDYVNQMGGRVILEKIDQPKAEY
KNILECFEDGFNHEKIVTSRIYNLTDIATEEKEHATISLLKWFIDEQVEEENNFNTIIRKLRRAESNPAVLYMLDDELSA
RVFTPPTNTGA

Specific function: Iron-storage protein [H]

COG id: COG1528

COG function: function code P; Ferritin-like protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Homo sapiens, GI56682959, Length=148, Percent_Identity=34.4594594594595, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI29126241, Length=125, Percent_Identity=35.2, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI13994244, Length=162, Percent_Identity=30.8641975308642, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788216, Length=160, Percent_Identity=35, Blast_Score=113, Evalue=6e-27,
Organism=Escherichia coli, GI1788212, Length=145, Percent_Identity=28.2758620689655, Blast_Score=75, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17506345, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17558956, Length=154, Percent_Identity=33.7662337662338, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641673, Length=142, Percent_Identity=30.2816901408451, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR001519 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: =1.16.3.1 [H]

Molecular weight: Translated: 19935; Mature: 19935

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEKLLKALNNQINFEFYSSYIYLAMASYAESEDLAGFANFFRVQAQEEIFHAMKFYDY
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNQMGGRVILEKIDQPKAEYKNILECFEDGFNHEKIVTSRIYNLTDIATEEKEHATISLL
HHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
KWFIDEQVEEENNFNTIIRKLRRAESNPAVLYMLDDELSARVFTPPTNTGA
HHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCC
>Mature Secondary Structure
MLSEKLLKALNNQINFEFYSSYIYLAMASYAESEDLAGFANFFRVQAQEEIFHAMKFYDY
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNQMGGRVILEKIDQPKAEYKNILECFEDGFNHEKIVTSRIYNLTDIATEEKEHATISLL
HHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
KWFIDEQVEEENNFNTIIRKLRRAESNPAVLYMLDDELSARVFTPPTNTGA
HHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA