Click here to switch to the map view.

The map label for this gene is 226948892

Identifier: 226948892

GI number: 226948892

Start: 1833738

End: 1834157

Strand: Direct

Name: 226948892

Synonym: CLM_1802

Alternate gene names: NA

Gene position: 1833738-1834157 (Clockwise)

Preceding gene: 226948891

Following gene: 226948893

Centisome position: 44.13

GC content: 26.43

Gene sequence:

>420_bases
TTGAGAAAACCAAGAACGGCAGAAGTAACAGCATATCTTCAATCTGATATAAAGTCTGTTTGGAATGTGGTTACTAATAA
TAATGACTATAAGTGGCGTAGCGATATTGAAAAAATTGAAATTATTAATGATGGAAAAGAATTTATTGAGTATACTCCTA
GTGGAATTGCTACAAAATTTTTTATTACTAAGAAGGAAGAGCATAGCCAATATAAATTTAGTATGGGAAATAAAATGTTT
ACTGGTTTTTGGACTGGACATTTTTCAGAAACAAAAAATGGTGGAACAAAGATAGTTTTTATAGAAAACATATTTATAAA
AAATCCAATCATTAAGATTTTATCTTATTTTTTTATGGATTTAAAGAAAATGCAAAATACATATATATTAGATTTAAAAA
AGAAGTTAGGGGAACAGTGA

Upstream 100 bases:

>100_bases
AATATGTTATAATAATATTAAAATTTAGGAAAGTTTAGGAAAAAACATCATTTTGTTACTTTTTAATGTGACTAAATTTG
AAATTTAGGGGTTGAATATT

Downstream 100 bases:

>100_bases
TGACAAAAGGAGATTTAAATAATGTTAAAAGGCAAAGACAGACAAAGTATAGATGTTGCAAGATTATATTATCAATCTGA
ATATAGTCAACATGAGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRKPRTAEVTAYLQSDIKSVWNVVTNNNDYKWRSDIEKIEIINDGKEFIEYTPSGIATKFFITKKEEHSQYKFSMGNKMF
TGFWTGHFSETKNGGTKIVFIENIFIKNPIIKILSYFFMDLKKMQNTYILDLKKKLGEQ

Sequences:

>Translated_139_residues
MRKPRTAEVTAYLQSDIKSVWNVVTNNNDYKWRSDIEKIEIINDGKEFIEYTPSGIATKFFITKKEEHSQYKFSMGNKMF
TGFWTGHFSETKNGGTKIVFIENIFIKNPIIKILSYFFMDLKKMQNTYILDLKKKLGEQ
>Mature_139_residues
MRKPRTAEVTAYLQSDIKSVWNVVTNNNDYKWRSDIEKIEIINDGKEFIEYTPSGIATKFFITKKEEHSQYKFSMGNKMF
TGFWTGHFSETKNGGTKIVFIENIFIKNPIIKILSYFFMDLKKMQNTYILDLKKKLGEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16399; Mature: 16399

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPRTAEVTAYLQSDIKSVWNVVTNNNDYKWRSDIEKIEIINDGKEFIEYTPSGIATKF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCHHHHHCCCCCCEEEE
FITKKEEHSQYKFSMGNKMFTGFWTGHFSETKNGGTKIVFIENIFIKNPIIKILSYFFMD
EEEECCCCCCEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECEECCCHHHHHHHHHHHH
LKKMQNTYILDLKKKLGEQ
HHHHCCHHEEEEHHHCCCC
>Mature Secondary Structure
MRKPRTAEVTAYLQSDIKSVWNVVTNNNDYKWRSDIEKIEIINDGKEFIEYTPSGIATKF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCHHHHHCCCCCCEEEE
FITKKEEHSQYKFSMGNKMFTGFWTGHFSETKNGGTKIVFIENIFIKNPIIKILSYFFMD
EEEECCCCCCEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECEECCCHHHHHHHHHHHH
LKKMQNTYILDLKKKLGEQ
HHHHCCHHEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA