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The map label for this gene is 226948715

Identifier: 226948715

GI number: 226948715

Start: 1686599

End: 1686820

Strand: Reverse

Name: 226948715

Synonym: CLM_1615

Alternate gene names: NA

Gene position: 1686820-1686599 (Counterclockwise)

Preceding gene: 226948717

Following gene: 226948714

Centisome position: 40.59

GC content: 32.43

Gene sequence:

>222_bases
TTGAGGAAACTAAGGACGAAACTAGGGTACACGCAAGAAACTCTAGGAGAAAGAATTGGAGTAGAGCAACCTTATATAAG
CAGATTAGAAAATGGCGAAATAGAATTTATGACAATAGGGAAATTAAAAAAATTATCTCGCGCTTTACAAGTTCATCCTG
TAAAGCTTTTAGAAATATTATTGAAAGAAGAAAGGAAAGGAAAAAGAAATGGCTGTTTATAA

Upstream 100 bases:

>100_bases
ATAATGTTAGCACAAATAATATAACCAGTAGTTATATTTCCGACATTTTCCACGTTACTTTTTTGTTGAATATTGTACAA
TTATAAAGGGTGATGTCGAA

Downstream 100 bases:

>100_bases
AAATGAAGAAAGAGGAACTTATTTTTGTACTTTTTATTACACTGATTGGACAGGTAAAAAGAAAAGAAAAAAGAAAGAAG
GTTTTAAAAGACAAAAAGAT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MRKLRTKLGYTQETLGERIGVEQPYISRLENGEIEFMTIGKLKKLSRALQVHPVKLLEILLKEERKGKRNGCL

Sequences:

>Translated_73_residues
MRKLRTKLGYTQETLGERIGVEQPYISRLENGEIEFMTIGKLKKLSRALQVHPVKLLEILLKEERKGKRNGCL
>Mature_73_residues
MRKLRTKLGYTQETLGERIGVEQPYISRLENGEIEFMTIGKLKKLSRALQVHPVKLLEILLKEERKGKRNGCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8480; Mature: 8480

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLRTKLGYTQETLGERIGVEQPYISRLENGEIEFMTIGKLKKLSRALQVHPVKLLEIL
CCCHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHH
LKEERKGKRNGCL
HHHHHCCCCCCCC
>Mature Secondary Structure
MRKLRTKLGYTQETLGERIGVEQPYISRLENGEIEFMTIGKLKKLSRALQVHPVKLLEIL
CCCHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHH
LKEERKGKRNGCL
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA