Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 226948489

GI number: 226948489

Start: 1438976

End: 1440259

Strand: Reverse

Name: ybjZ [C]

Synonym: CLM_1378

Alternate gene names: 226948489

Gene position: 1440259-1438976 (Counterclockwise)

Preceding gene: 226948490

Following gene: 226948488

Centisome position: 34.66

GC content: 28.58

Gene sequence:

>1284_bases
ATGAAGCTTACTGACCTTGCAGAAATTATATGGAGAAACCTTTTAAAAAGAAAAGGAAGAACATTTTTAACTATGCTCGG
AGTAATTATAGGTAGTATAGCTATATATGTAATAATATCTCTTGGAAATGGATTTGAAAAATATATGTCCTCACAATTAA
ATTCTTTTGGAGATGTAAACATAATAAATATTTTCCCCTATTCAGATTCTACTACAACCTATCAAGGAGGCAATATAAAA
AATAGAAAAAAAATATTAAATGATAAAACATTAAAGGAATTAAATAAATTAGAATTTGTAAAATATTCAATACCAAAACT
TAATACTAATGCAGATATAGCTTATAAAAAATCAGAAATGAAGTCTAGTAATTTAACGGGTATGTCATTTAAAAACTATA
GTAAAGATCACGAACTTTTATTTGGTAAATATCCTAATGATTCTAAAAATGAAGTGGTTATAGGCTATAAATTAGCTGCT
TACCTTATAAATAAAAAAGATGTAGATAACGTAAAAGAAGAAGAAATTAAAAAGATTCTAAGAAAAAAATTAAAGGTAAA
AGTTTCTAGACCAAATGAAAAAGGTGAAGAAGAATGGACAACCTATACGGTAAAAGTAAGTGGCATCTGCAAAGAAAATT
TCTCAGATGATTATCAAATTAAAGCTCCTTTATCCTTCACCAAAGATATATTAACTTATAAAAATAATGATGAAAATTTT
CTAAAAAATAAGGGTTATGAAAGTATAGATTTAGTACTTAAAAGCCAAGAAAAAAGCAGCCAAGCAGAGAAGTACTTAAA
GGACAATGGATACTTATATCAATCCCTTAAAGAAATGCAAAACAGCATAGGTAAAACCTTAAGTGGAATAAAATTAATAT
TAAGTGCCATAGGTGGTATTTCTTTATTAGTGGCAGCCTTTGGTATAGCCAATACAATGAATATGTCCATACTGGAGAGA
AAAAAAGAAATTGGAGTTATGAAGGTAGTAGGTGCCTCTGTAGGAGATATAAAAAAAATCTTCATAGGTGAAGCCACTGC
TATAGGTTTCTCAGGAGGGGTTGTAGGATTACTTATAGGAAGTTTTATAAGTTTTGTAATAAATACAATGCTAAAATCTA
AACTTTCTACATCCTCTAGCGGTGATGTAAAAATAGCTGTATCTAGTATGGGTCTTGTAACTTTTGTATTGTTCTTTTCA
TCCTGTGTAGGATTTTTATCTGGTTTATATCCGGCCTCTAAAGCAGCTAAACTAGATGTAATAAGCTCTATAAAAGATGA
ATAA

Upstream 100 bases:

>100_bases
ATTAAAGGAAAGATTGACGACACTAATACTGTAAAAAAAGAAAAAAAGAGTTCTGGTATACTAGGTTTTTTTAAAGGCCT
ATTAGGAATAGGTGATTAAT

Downstream 100 bases:

>100_bases
CTTATTTTTATAAGGATAATTAAATTCCCATAAAGATTTAATAATGCAATTATTTTTATTTATATATTTAAACAAATTTA
TTATATTATATAGGAGGTTT

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKLTDLAEIIWRNLLKRKGRTFLTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNIINIFPYSDSTTTYQGGNIK
NRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKSSNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAA
YLINKKDVDNVKEEEIKKILRKKLKVKVSRPNEKGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENF
LKNKGYESIDLVLKSQEKSSQAEKYLKDNGYLYQSLKEMQNSIGKTLSGIKLILSAIGGISLLVAAFGIANTMNMSILER
KKEIGVMKVVGASVGDIKKIFIGEATAIGFSGGVVGLLIGSFISFVINTMLKSKLSTSSSGDVKIAVSSMGLVTFVLFFS
SCVGFLSGLYPASKAAKLDVISSIKDE

Sequences:

>Translated_427_residues
MKLTDLAEIIWRNLLKRKGRTFLTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNIINIFPYSDSTTTYQGGNIK
NRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKSSNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAA
YLINKKDVDNVKEEEIKKILRKKLKVKVSRPNEKGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENF
LKNKGYESIDLVLKSQEKSSQAEKYLKDNGYLYQSLKEMQNSIGKTLSGIKLILSAIGGISLLVAAFGIANTMNMSILER
KKEIGVMKVVGASVGDIKKIFIGEATAIGFSGGVVGLLIGSFISFVINTMLKSKLSTSSSGDVKIAVSSMGLVTFVLFFS
SCVGFLSGLYPASKAAKLDVISSIKDE
>Mature_427_residues
MKLTDLAEIIWRNLLKRKGRTFLTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNIINIFPYSDSTTTYQGGNIK
NRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKSSNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAA
YLINKKDVDNVKEEEIKKILRKKLKVKVSRPNEKGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENF
LKNKGYESIDLVLKSQEKSSQAEKYLKDNGYLYQSLKEMQNSIGKTLSGIKLILSAIGGISLLVAAFGIANTMNMSILER
KKEIGVMKVVGASVGDIKKIFIGEATAIGFSGGVVGLLIGSFISFVINTMLKSKLSTSSSGDVKIAVSSMGLVTFVLFFS
SCVGFLSGLYPASKAAKLDVISSIKDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=451, Percent_Identity=24.6119733924612, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 47370; Mature: 47370

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTDLAEIIWRNLLKRKGRTFLTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVN
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEE
IINIFPYSDSTTTYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEM
EEEEEECCCCCCEECCCCCCHHHHHHCHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHHH
KSSNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAAYLINKKDVDNVKEEEIKKIL
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEHHHHHHCCCCCCCCCHHHHHHHH
RKKLKVKVSRPNEKGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENF
HHHHEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCHHHHHHHHHCCCCCHHH
LKNKGYESIDLVLKSQEKSSQAEKYLKDNGYLYQSLKEMQNSIGKTLSGIKLILSAIGGI
HHHCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLVAAFGIANTMNMSILERKKEIGVMKVVGASVGDIKKIFIGEATAIGFSGGVVGLLIG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCEEECCCCCHHHHHHH
SFISFVINTMLKSKLSTSSSGDVKIAVSSMGLVTFVLFFSSCVGFLSGLYPASKAAKLDV
HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ISSIKDE
HHHHCCC
>Mature Secondary Structure
MKLTDLAEIIWRNLLKRKGRTFLTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVN
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEE
IINIFPYSDSTTTYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEM
EEEEEECCCCCCEECCCCCCHHHHHHCHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHHH
KSSNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAAYLINKKDVDNVKEEEIKKIL
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEHHHHHHCCCCCCCCCHHHHHHHH
RKKLKVKVSRPNEKGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENF
HHHHEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCHHHHHHHHHCCCCCHHH
LKNKGYESIDLVLKSQEKSSQAEKYLKDNGYLYQSLKEMQNSIGKTLSGIKLILSAIGGI
HHHCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLVAAFGIANTMNMSILERKKEIGVMKVVGASVGDIKKIFIGEATAIGFSGGVVGLLIG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCEEECCCCCHHHHHHH
SFISFVINTMLKSKLSTSSSGDVKIAVSSMGLVTFVLFFSSCVGFLSGLYPASKAAKLDV
HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ISSIKDE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]