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The map label for this gene is 226948488

Identifier: 226948488

GI number: 226948488

Start: 1438178

End: 1438870

Strand: Reverse

Name: 226948488

Synonym: CLM_1377

Alternate gene names: NA

Gene position: 1438870-1438178 (Counterclockwise)

Preceding gene: 226948489

Following gene: 226948487

Centisome position: 34.63

GC content: 25.54

Gene sequence:

>693_bases
ATGGAACAACAAGAAAATGTAAATACCAATTTAAACTTAACTTTAAAAGAAAAATTTAAATTTTTCTTTACATCCCCTTC
AAAGCTATTTGAATATTATAGAGAAAACCCTAAATTTGGAATATTATTTTTAATAACAACTATTTGTGCAATCATTTATC
AAATAATACATTCTAATCTTACAAAGGAAATTGTAAAAAAACAGATGGAAAAACAATTTGAAGGATTAGATCCACAAGCC
TTAGAAATGACAAAAAAAACTATGGATACTATGAATAATCCTGCTCTAAAAATAGGTTCTGCCCTAATAGGTGTATTAAT
AGCTGTATTTGGTGTGGCTCTTTTAATATTTATAATTTTTAAAATCTCAAAAGTTGCTCTAAGCTATCAACAAACCGTAA
CATTATATTTAGTAGCTGGTTTATCCACTTGTATAGGTAGTATGTTTAAAGCTATATATATGCTTATAAGTAAAAAAGCT
GTAGGTACTAATGCTATCTTAAATCCTTCTTTAAAAAATACTTTAATAGCTAATATTGATATTTTTAATATATGGTACTA
TGTACTTTTAGGTATTGGTATTTATGCTATGGGCAAAACATCTAAGAAAAAGGCTACTATATTAACTATAATATTAGCAA
TTTTAAGCATTGGAGTTGCCGTTTTACCTTTTTTAGTTGGAATAAAAAAATAA

Upstream 100 bases:

>100_bases
TTTTATAAGGATAATTAAATTCCCATAAAGATTTAATAATGCAATTATTTTTATTTATATATTTAAACAAATTTATTATA
TTATATAGGAGGTTTCATTT

Downstream 100 bases:

>100_bases
TTAATACTGTATATATTAAAAAGCGTGAAAATTCATCACGCTTTTTATGTTATATTTAATAAGTAATGTTAAATATAATT
TTCATTAACTTTTTTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILFLITTICAIIYQIIHSNLTKEIVKKQMEKQFEGLDPQA
LEMTKKTMDTMNNPALKIGSALIGVLIAVFGVALLIFIIFKISKVALSYQQTVTLYLVAGLSTCIGSMFKAIYMLISKKA
VGTNAILNPSLKNTLIANIDIFNIWYYVLLGIGIYAMGKTSKKKATILTIILAILSIGVAVLPFLVGIKK

Sequences:

>Translated_230_residues
MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILFLITTICAIIYQIIHSNLTKEIVKKQMEKQFEGLDPQA
LEMTKKTMDTMNNPALKIGSALIGVLIAVFGVALLIFIIFKISKVALSYQQTVTLYLVAGLSTCIGSMFKAIYMLISKKA
VGTNAILNPSLKNTLIANIDIFNIWYYVLLGIGIYAMGKTSKKKATILTIILAILSIGVAVLPFLVGIKK
>Mature_230_residues
MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILFLITTICAIIYQIIHSNLTKEIVKKQMEKQFEGLDPQA
LEMTKKTMDTMNNPALKIGSALIGVLIAVFGVALLIFIIFKISKVALSYQQTVTLYLVAGLSTCIGSMFKAIYMLISKKA
VGTNAILNPSLKNTLIANIDIFNIWYYVLLGIGIYAMGKTSKKKATILTIILAILSIGVAVLPFLVGIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25678; Mature: 25678

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILFLITTICAIIYQIIHSNL
CCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TKEIVKKQMEKQFEGLDPQALEMTKKTMDTMNNPALKIGSALIGVLIAVFGVALLIFIIF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KISKVALSYQQTVTLYLVAGLSTCIGSMFKAIYMLISKKAVGTNAILNPSLKNTLIANID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IFNIWYYVLLGIGIYAMGKTSKKKATILTIILAILSIGVAVLPFLVGIKK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILFLITTICAIIYQIIHSNL
CCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TKEIVKKQMEKQFEGLDPQALEMTKKTMDTMNNPALKIGSALIGVLIAVFGVALLIFIIF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KISKVALSYQQTVTLYLVAGLSTCIGSMFKAIYMLISKKAVGTNAILNPSLKNTLIANID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IFNIWYYVLLGIGIYAMGKTSKKKATILTIILAILSIGVAVLPFLVGIKK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA