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The map label for this gene is 226948339

Identifier: 226948339

GI number: 226948339

Start: 1269800

End: 1270606

Strand: Reverse

Name: 226948339

Synonym: CLM_1221

Alternate gene names: NA

Gene position: 1270606-1269800 (Counterclockwise)

Preceding gene: 226948342

Following gene: 226948338

Centisome position: 30.58

GC content: 27.14

Gene sequence:

>807_bases
ATGAAATTAAAAGTCTTAGTAGATAATAATACATACATTGACCAATATTATTGTGGTGAACCTGCTGTTTCATACTACAT
TGAAGATGAAGATACTAGTTTTCTATTTGATGTAGGGTATTCTGATTTATTTATTAGAAACTCAAATGCACTAGGGATAG
ATTTACAAAATATAAGTTCTATTGTTATTTCACATGGTCATGATGATCACACAAGAGGATTAAAATACTATTTTGAACAA
AACCATAAAAATAATATTTCTATTATTGCTCATCCCAATGCATTTAAAGAAAAAATGATAGGCAATTTAAAAATTTGCTC
TCCTATTTTGGAGAAAGAACTAAAAGAAAAATGTAATCTAATTCTTTCTAAAGAACCTAAAAAAATTAGCAAACATATAA
CTTTTTTAGGAGAAATACCTGAATTAAATGACTTTGAAAATAGAAAACCTATTGGTAAACAGATTATTGGTGAAAATTCA
ATTGATGATTACGTAATAGATGATACAGCTCTTGTATATAAAAGTGAAAATGGCATTTATATTATTACAGGATGTTCTCA
CAGTGGGATATGCAATATAATAGAATATGCAAAAAAAGTATGCAAAGATAATAGAGTACTAGGAGTTATAGGAGGATTTC
ATTTATTCGAGGTGAATGAACAAGTTAATAAAACTATAGATTATTTAAAACAGAACAACGTAAAAGAATTATATCCTTGC
CATTGTACTTCATTTTCTGTTAGAGCAGAAATACACAAAACTTTGCCTTTAAAAGAAGTTGGAGTAGGATTAGAACTGAA
TTGGTAA

Upstream 100 bases:

>100_bases
TTGAAATTAATATTAGTAATGTATACAATTAGACTATGATTTAGTATAAATTCATAATCTATGGAAAAATCTATTTGCAT
TACATAAAGGAGTTAAAAAT

Downstream 100 bases:

>100_bases
TATCATGATATCAATTTAAAAAAGCAACTAAAACAAAGGAAGAAATGGATCTTACTTCTTAATTGGAGATATAATAAAAT
AGAAATTATTTATATTTTAT

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKLKVLVDNNTYIDQYYCGEPAVSYYIEDEDTSFLFDVGYSDLFIRNSNALGIDLQNISSIVISHGHDDHTRGLKYYFEQ
NHKNNISIIAHPNAFKEKMIGNLKICSPILEKELKEKCNLILSKEPKKISKHITFLGEIPELNDFENRKPIGKQIIGENS
IDDYVIDDTALVYKSENGIYIITGCSHSGICNIIEYAKKVCKDNRVLGVIGGFHLFEVNEQVNKTIDYLKQNNVKELYPC
HCTSFSVRAEIHKTLPLKEVGVGLELNW

Sequences:

>Translated_268_residues
MKLKVLVDNNTYIDQYYCGEPAVSYYIEDEDTSFLFDVGYSDLFIRNSNALGIDLQNISSIVISHGHDDHTRGLKYYFEQ
NHKNNISIIAHPNAFKEKMIGNLKICSPILEKELKEKCNLILSKEPKKISKHITFLGEIPELNDFENRKPIGKQIIGENS
IDDYVIDDTALVYKSENGIYIITGCSHSGICNIIEYAKKVCKDNRVLGVIGGFHLFEVNEQVNKTIDYLKQNNVKELYPC
HCTSFSVRAEIHKTLPLKEVGVGLELNW
>Mature_268_residues
MKLKVLVDNNTYIDQYYCGEPAVSYYIEDEDTSFLFDVGYSDLFIRNSNALGIDLQNISSIVISHGHDDHTRGLKYYFEQ
NHKNNISIIAHPNAFKEKMIGNLKICSPILEKELKEKCNLILSKEPKKISKHITFLGEIPELNDFENRKPIGKQIIGENS
IDDYVIDDTALVYKSENGIYIITGCSHSGICNIIEYAKKVCKDNRVLGVIGGFHLFEVNEQVNKTIDYLKQNNVKELYPC
HCTSFSVRAEIHKTLPLKEVGVGLELNW

Specific function: Unknown

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 30568; Mature: 30568

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKVLVDNNTYIDQYYCGEPAVSYYIEDEDTSFLFDVGYSDLFIRNSNALGIDLQNISS
CEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEECCCEEEEEHHHHHE
IVISHGHDDHTRGLKYYFEQNHKNNISIIAHPNAFKEKMIGNLKICSPILEKELKEKCNL
EEEECCCCCHHCHHHHEEECCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCE
ILSKEPKKISKHITFLGEIPELNDFENRKPIGKQIIGENSIDDYVIDDTALVYKSENGIY
EECCCCHHHHHHEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCEEECCEEEEEECCCCEE
IITGCSHSGICNIIEYAKKVCKDNRVLGVIGGFHLFEVNEQVNKTIDYLKQNNVKELYPC
EEECCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEECCHHHHHHHHHHHHCCCCCCCCC
HCTSFSVRAEIHKTLPLKEVGVGLELNW
CCCCEEEEEHHHHCCCHHHHCCCEEECC
>Mature Secondary Structure
MKLKVLVDNNTYIDQYYCGEPAVSYYIEDEDTSFLFDVGYSDLFIRNSNALGIDLQNISS
CEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEECCCEEEEEHHHHHE
IVISHGHDDHTRGLKYYFEQNHKNNISIIAHPNAFKEKMIGNLKICSPILEKELKEKCNL
EEEECCCCCHHCHHHHEEECCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCE
ILSKEPKKISKHITFLGEIPELNDFENRKPIGKQIIGENSIDDYVIDDTALVYKSENGIY
EECCCCHHHHHHEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCEEECCEEEEEECCCCEE
IITGCSHSGICNIIEYAKKVCKDNRVLGVIGGFHLFEVNEQVNKTIDYLKQNNVKELYPC
EEECCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEECCHHHHHHHHHHHHCCCCCCCCC
HCTSFSVRAEIHKTLPLKEVGVGLELNW
CCCCEEEEEHHHHCCCHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]