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The map label for this gene is 226948338

Identifier: 226948338

GI number: 226948338

Start: 1268983

End: 1269684

Strand: Reverse

Name: 226948338

Synonym: CLM_1220

Alternate gene names: NA

Gene position: 1269684-1268983 (Counterclockwise)

Preceding gene: 226948339

Following gene: 226948330

Centisome position: 30.56

GC content: 30.91

Gene sequence:

>702_bases
ATGAATATAGATATACCAATAATAAAAAACAAATCTGTACAATTAACTATAATTACTTCTATTGTCCTGATGTGCTGTAT
CATTATGGGTATCGTGGATGCTATAATTAAACCCAGCTATGCTGTGAAATCTGCATTTAAAATCATTTTATTTTTAGGGT
GTCCATTGGTATATTCTCATCTGACCAAGCAGTTATCCTTAAAAAAATTGTTTTGTTTTAAAAAACAAAGCTTTTTTATG
TCATTGTTCCTTGGCGTGGGAGTTTTTATTGTTATAATGGGTACATATTTTTCCTTAAGAAATGTATTGGATTTGTCTGG
AATTACAGTTGCTCTGCAAAGTAATATAGGTGTTAGTAAAAATAACTTCGTGTTTGTCTCCCTATATATCTCCTTTGTTA
ATTCGCTCCTTGAAGAATTCTTTTTTCGGGGTTTCGCTTTTTTGTCGCTGAAAAAATTTACTTCACGATCTTTGGCATAC
AGTATCAGTTCCATAGCTTTTGCCTTATATCACATTGCAATGATGCTTGGATGGTTCTCTATAGTTACTTTTGTGTTGGT
AATGATGGGACTAGTAGTAGGTGGAATTATATTTAACTTTTTAAATGAGAAAAATGAGGATATATACTCCTCCTGGATGG
TACATATGTTTGCTAACTTTGCAATTAATGTAATAGGATTTATTTTATTTGGAATATTTTGA

Upstream 100 bases:

>100_bases
TTAAAAAAGCAACTAAAACAAAGGAAGAAATGGATCTTACTTCTTAATTGGAGATATAATAAAATAGAAATTATTTATAT
TTTATGGAGGATATAATGGT

Downstream 100 bases:

>100_bases
TTTATAACAACTGTAATTTGTAAGTTATTAACTAAATTAATTAATTTAATATGCTAGCTTTCCTTGGTTTAAAAAATAGG
GATATGTAGTTAAAAAGGCA

Product: CAAX amino terminal protease family protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNIDIPIIKNKSVQLTIITSIVLMCCIIMGIVDAIIKPSYAVKSAFKIILFLGCPLVYSHLTKQLSLKKLFCFKKQSFFM
SLFLGVGVFIVIMGTYFSLRNVLDLSGITVALQSNIGVSKNNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAY
SISSIAFALYHIAMMLGWFSIVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF

Sequences:

>Translated_233_residues
MNIDIPIIKNKSVQLTIITSIVLMCCIIMGIVDAIIKPSYAVKSAFKIILFLGCPLVYSHLTKQLSLKKLFCFKKQSFFM
SLFLGVGVFIVIMGTYFSLRNVLDLSGITVALQSNIGVSKNNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAY
SISSIAFALYHIAMMLGWFSIVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF
>Mature_233_residues
MNIDIPIIKNKSVQLTIITSIVLMCCIIMGIVDAIIKPSYAVKSAFKIILFLGCPLVYSHLTKQLSLKKLFCFKKQSFFM
SLFLGVGVFIVIMGTYFSLRNVLDLSGITVALQSNIGVSKNNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAY
SISSIAFALYHIAMMLGWFSIVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26244; Mature: 26244

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDIPIIKNKSVQLTIITSIVLMCCIIMGIVDAIIKPSYAVKSAFKIILFLGCPLVYSH
CCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
LTKQLSLKKLFCFKKQSFFMSLFLGVGVFIVIMGTYFSLRNVLDLSGITVALQSNIGVSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
NNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAYSISSIAFALYHIAMMLGWFS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIDIPIIKNKSVQLTIITSIVLMCCIIMGIVDAIIKPSYAVKSAFKIILFLGCPLVYSH
CCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
LTKQLSLKKLFCFKKQSFFMSLFLGVGVFIVIMGTYFSLRNVLDLSGITVALQSNIGVSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
NNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAYSISSIAFALYHIAMMLGWFS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA