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The map label for this gene is yfcE [H]

Identifier: 226948272

GI number: 226948272

Start: 1193594

End: 1194139

Strand: Reverse

Name: yfcE [H]

Synonym: CLM_1152

Alternate gene names: 226948272

Gene position: 1194139-1193594 (Counterclockwise)

Preceding gene: 226948289

Following gene: 226948268

Centisome position: 28.74

GC content: 27.66

Gene sequence:

>546_bases
ATGAAATTATTTTTTATGTCTGATATTCATGGTTCAGCTTATTATCTGGAAAAAGCTTTACATATATTTGAAGAAGAAAA
AGCAGATTATCTAATTATTTTAGGTGATGAACTTTATCATGGTGCTAGGAATCCTCTCCCTAAAGGATATGATCCTAAAA
AGGTAACAGAAATTCTAAATTCCTATAAAGATAAAATTATAGCTGTAAGAGGGAATTGCGAAAGTGAAGTAGATCAAATG
GTTCTTAATTATCCTATTATGAGTGATTATTCTATAGTTTTATATAATGGTAAAAGATTATTTTTAACTCACGGGCATAT
TTTTAATAAAGACAATATGCCTAATATAAGTGATGGAGATGCTTTAATATATGGTCATACTCATATACCTTTAGCAGAAA
AAATAAACAATATATTTGTAATTAATCCTGGCTCCATTACATTTCCGAAGGAAAATACACCTCATTGTTATGGAATACTT
AGTGACAACCTATTCAAAATAAAAACCTTAGAAGGGAATACTTTTAAAGAGATTTCTCTAATATAA

Upstream 100 bases:

>100_bases
TTTTTCTTATTATGTAAATTATGAAATAATTACTTTTAATAAAAATAAAAAAAATATATAATTATATTTATACTTTGTTA
TTAGGAAAGGAGTTATTTAT

Downstream 100 bases:

>100_bases
CTTTTATAAACAGATTTCTAAGCTTCAGAGGGATTTTTTACTCCCACTAAAGCTTATTAACAGAATTCTTAGGAGTTTTA
CTCCTTAGAAGTCGTTATCC

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKLFFMSDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILNSYKDKIIAVRGNCESEVDQM
VLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGDALIYGHTHIPLAEKINNIFVINPGSITFPKENTPHCYGIL
SDNLFKIKTLEGNTFKEISLI

Sequences:

>Translated_181_residues
MKLFFMSDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILNSYKDKIIAVRGNCESEVDQM
VLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGDALIYGHTHIPLAEKINNIFVINPGSITFPKENTPHCYGIL
SDNLFKIKTLEGNTFKEISLI
>Mature_181_residues
MKLFFMSDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILNSYKDKIIAVRGNCESEVDQM
VLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGDALIYGHTHIPLAEKINNIFVINPGSITFPKENTPHCYGIL
SDNLFKIKTLEGNTFKEISLI

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=170, Percent_Identity=51.1764705882353, Blast_Score=194, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 20672; Mature: 20672

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFFMSDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILN
CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHH
SYKDKIIAVRGNCESEVDQMVLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGD
HHCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECEEECCCCCCCCCCCC
ALIYGHTHIPLAEKINNIFVINPGSITFPKENTPHCYGILSDNLFKIKTLEGNTFKEISL
EEEEECCCCCHHHHCCEEEEECCCEEECCCCCCCEEEEEECCCEEEEEEECCCCEEEEEE
I
C
>Mature Secondary Structure
MKLFFMSDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNPLPKGYDPKKVTEILN
CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHH
SYKDKIIAVRGNCESEVDQMVLNYPIMSDYSIVLYNGKRLFLTHGHIFNKDNMPNISDGD
HHCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECEEECCCCCCCCCCCC
ALIYGHTHIPLAEKINNIFVINPGSITFPKENTPHCYGILSDNLFKIKTLEGNTFKEISL
EEEEECCCCCHHHHCCEEEEECCCEEECCCCCCCEEEEEECCCEEEEEEECCCCEEEEEE
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]