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The map label for this gene is 226948260

Identifier: 226948260

GI number: 226948260

Start: 1177523

End: 1177846

Strand: Direct

Name: 226948260

Synonym: CLM_1139

Alternate gene names: NA

Gene position: 1177523-1177846 (Clockwise)

Preceding gene: 226948259

Following gene: 226948261

Centisome position: 28.34

GC content: 29.94

Gene sequence:

>324_bases
ATGGCTTCAAATATAGAATTTGTAGAATATGTTTGTGATCAAATAAGTGGAGCTGGTGATATAACTTATAAAAAAATGTT
TGGTGATTATGGAGTCTACTGTAATGAAAAAATAATAGGATTAATATGTGATAATCAATTTTTCTTAAAAATAACAAAGG
CTGGTAAAGACTTATTGCATGAAGCAATAGAAGCTCCTGCTTATAAAGGTGCAAAGCCATCATTCCTCATTGAATCTTTG
GATAATAGGGAATACTTAGCTAAAATTGTGTCTGCGACTTATAAAGAGCTTCCTATGCCAAAACCTAAAAAAACTAAAAA
ATAG

Upstream 100 bases:

>100_bases
ATTATTAAGATTAATGTTCCTATTTTATATAGTGAACAGAAGGTATTTTATAAAAAGGATTTTAAATAATGACAAGTATT
CATATAATGGGGGAATGAAT

Downstream 100 bases:

>100_bases
TTAAAATTGGAATACAAAATATATTTAGTTAGGAGAGAATAAAGGATGTTTATTTATGATACATTAGAAAATATAGGTAT
TGAAACATTACATGAAACGT

Product: TfoX domain-containing protein

Products: NA

Alternate protein names: ORF 3 [H]

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MASNIEFVEYVCDQISGAGDITYKKMFGDYGVYCNEKIIGLICDNQFFLKITKAGKDLLHEAIEAPAYKGAKPSFLIESL
DNREYLAKIVSATYKELPMPKPKKTKK

Sequences:

>Translated_107_residues
MASNIEFVEYVCDQISGAGDITYKKMFGDYGVYCNEKIIGLICDNQFFLKITKAGKDLLHEAIEAPAYKGAKPSFLIESL
DNREYLAKIVSATYKELPMPKPKKTKK
>Mature_106_residues
ASNIEFVEYVCDQISGAGDITYKKMFGDYGVYCNEKIIGLICDNQFFLKITKAGKDLLHEAIEAPAYKGAKPSFLIESLD
NREYLAKIVSATYKELPMPKPKKTKK

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007076 [H]

Pfam domain/function: PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 12049; Mature: 11918

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNIEFVEYVCDQISGAGDITYKKMFGDYGVYCNEKIIGLICDNQFFLKITKAGKDLLH
CCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCEECCEEEEEEECCEEEEEEHHHHHHHHH
EAIEAPAYKGAKPSFLIESLDNREYLAKIVSATYKELPMPKPKKTKK
HHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ASNIEFVEYVCDQISGAGDITYKKMFGDYGVYCNEKIIGLICDNQFFLKITKAGKDLLH
CCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCEECCEEEEEEECCEEEEEEHHHHHHHHH
EAIEAPAYKGAKPSFLIESLDNREYLAKIVSATYKELPMPKPKKTKK
HHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1987149 [H]