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The map label for this gene is 226948203

Identifier: 226948203

GI number: 226948203

Start: 1127732

End: 1128466

Strand: Direct

Name: 226948203

Synonym: CLM_1078

Alternate gene names: NA

Gene position: 1127732-1128466 (Clockwise)

Preceding gene: 226948202

Following gene: 226948204

Centisome position: 27.14

GC content: 30.75

Gene sequence:

>735_bases
ATGAGATGGGATCAATATTTAAGATATGCTGAATTATGCAGAGAAAGAATAGGGTCATTTTCTGAATATCCGTATTGCTT
ATCAGCGATAAAAGATTTGTCTAGAATAGAGTTTCATCCCAAAGTGACATATATTGTAGGTGAAAATGGGACCGGTAAAT
CAACAATACTTGAAGCTATTGCCATAGCATGTGGATTCAATCCAGAAGGTGGAACTAGAAATTTTAATTTTTCAACAAAG
GATACCCATTCAGATTTATATAAAAACCTTAAATTGGTTAGAGGAGTTAAAAGACCATACGATGGTTTTTTTCTAAGAGC
AGAAAGCTTCTATAATGTGGCTACAAATATAGATGAAATATATGAAATAGATGATTTAGATTCATATGGAGGAGTATCAC
TACATTCACAGTCTCATGGAGAATCTTTTTTATCAGTTATTAGGAATAGATTTAGCGGAAATGGTTTATATATTTTGGAT
GAGCCAGAAGCAGCATTATCTCCATCAAGGCAAATGTCTATGCTTGTTATAATGCATGAATTAATAAAGAAAAATTCTCA
GTTTATAATAGCTACTCATTCCCCTATAATAATGTCTTATCCAGATTCAATCATTTATGAATTAAGAGATGGTATAAAAG
AAGTTATGTACAAGGATACTGAACATTATAAAATTACAAGAAATTTTCTTGATAAACCTGAAAAAATGCTAAAGGTGCTT
TTATCAGAAGAGTAA

Upstream 100 bases:

>100_bases
AAGTTAGGAAGAATGATATAATTATTATTAGTTAAGATAAAACAGTAAGGTATAATGTCTTGCGTTTAATTGTTATATAT
CATTTGAGGAGTGGAGAAAA

Downstream 100 bases:

>100_bases
ATAATATGAACAAATTCATTAATATACATAAATAAATTTGGGGGTGTAGATATGAATAACTATATTATTAGAGAAAGTAA
CAGTGAAGAAGCAGATTTAA

Product: transporter

Products: NA

Alternate protein names: SMC Domain-Containing Protein; ABC Transporter; SMC Domain Protein; ATPase; Aaa ATPase; RecF/RecN/SMC; SMC Protein-Like Protein; ABC Transport System ATPase Component; ABC-Type Antimicrobial Peptide Transport System Protein; LOW QUALITY PROTEIN ABC Transporter

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGTRNFNFSTK
DTHSDLYKNLKLVRGVKRPYDGFFLRAESFYNVATNIDEIYEIDDLDSYGGVSLHSQSHGESFLSVIRNRFSGNGLYILD
EPEAALSPSRQMSMLVIMHELIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
LSEE

Sequences:

>Translated_244_residues
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGTRNFNFSTK
DTHSDLYKNLKLVRGVKRPYDGFFLRAESFYNVATNIDEIYEIDDLDSYGGVSLHSQSHGESFLSVIRNRFSGNGLYILD
EPEAALSPSRQMSMLVIMHELIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
LSEE
>Mature_244_residues
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGTRNFNFSTK
DTHSDLYKNLKLVRGVKRPYDGFFLRAESFYNVATNIDEIYEIDDLDSYGGVSLHSQSHGESFLSVIRNRFSGNGLYILD
EPEAALSPSRQMSMLVIMHELIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
LSEE

Specific function: Unknown

COG id: COG3910

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28101; Mature: 28101

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAI
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
AIACGFNPEGGTRNFNFSTKDTHSDLYKNLKLVRGVKRPYDGFFLRAESFYNVATNIDEI
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCHHHH
YEIDDLDSYGGVSLHSQSHGESFLSVIRNRFSGNGLYILDEPEAALSPSRQMSMLVIMHE
HCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHHHHHHH
LIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
HHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
LSEE
HCCC
>Mature Secondary Structure
MRWDQYLRYAELCRERIGSFSEYPYCLSAIKDLSRIEFHPKVTYIVGENGTGKSTILEAI
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
AIACGFNPEGGTRNFNFSTKDTHSDLYKNLKLVRGVKRPYDGFFLRAESFYNVATNIDEI
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCHHHH
YEIDDLDSYGGVSLHSQSHGESFLSVIRNRFSGNGLYILDEPEAALSPSRQMSMLVIMHE
HCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHHHHHHH
LIKKNSQFIIATHSPIIMSYPDSIIYELRDGIKEVMYKDTEHYKITRNFLDKPEKMLKVL
HHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
LSEE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA