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The map label for this gene is 226948165

Identifier: 226948165

GI number: 226948165

Start: 1090939

End: 1091529

Strand: Direct

Name: 226948165

Synonym: CLM_1039

Alternate gene names: NA

Gene position: 1090939-1091529 (Clockwise)

Preceding gene: 226948164

Following gene: 226948168

Centisome position: 26.25

GC content: 29.27

Gene sequence:

>591_bases
GTGGTGGGGAAAAGTTTATCAGAAATGTCACTTGAAGAATTATGGATGCTGTTTCCAATAATATTAGAAGAACATAATCC
TATGTGGAAAGAGTGGTATTTAGAAGAAGAAAAGTTAATTATCAGTAGCATTGGAAATCATAATATAGAACGAATAAATC
ATATTGGAAGTACTTCTGTTAATGGATTAATTGCAAAGCCAACAATAGATATATTGCTTGAAATAACAAAGGATTGTGAT
TTGAAGTTTTTAGTAAATATGTTAGAGGAGAATGGATATATTTTTGAAAATCAACCACAGAAACCAGCGCCACATATGAT
GTTTATGAAAGGTTATACAGAGAAAGGATTTTCTGAAAAGGTATTTCATCTTCATGTAAGATATTTAGGTGATTGGGATG
AATTATATTTTAGAGATTATCTGCGATCACATACAGATATTTCTCAAGCGTATGGAGAATTAAAAATTGCCCTTAAAGAT
AAATATGAACATAATAGAGATGATTATACCGAAGCAAAAACGGAGTTTATTAGAAAATATACTACTATTGCAAAAATAGA
ATTTAAGAATAAATACAGCCCAAGAAAATGA

Upstream 100 bases:

>100_bases
AAATTGAAGATTAATATTTTGAAAATGGAATAATAGAGTATTCCTATGTTATAATTTACAAAAAGATTATGCATATTTTA
TTTCATAGAAGGAGAATTGA

Downstream 100 bases:

>100_bases
AAAATAAATATTTACCCTCATTTAACTATATTAATTTGTGTTAACTGAGGGTAGTGTCTAGTACCTATAAATGCATAAGA
TTATACTATTGTAACTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MVGKSLSEMSLEELWMLFPIILEEHNPMWKEWYLEEEKLIISSIGNHNIERINHIGSTSVNGLIAKPTIDILLEITKDCD
LKFLVNMLEENGYIFENQPQKPAPHMMFMKGYTEKGFSEKVFHLHVRYLGDWDELYFRDYLRSHTDISQAYGELKIALKD
KYEHNRDDYTEAKTEFIRKYTTIAKIEFKNKYSPRK

Sequences:

>Translated_196_residues
MVGKSLSEMSLEELWMLFPIILEEHNPMWKEWYLEEEKLIISSIGNHNIERINHIGSTSVNGLIAKPTIDILLEITKDCD
LKFLVNMLEENGYIFENQPQKPAPHMMFMKGYTEKGFSEKVFHLHVRYLGDWDELYFRDYLRSHTDISQAYGELKIALKD
KYEHNRDDYTEAKTEFIRKYTTIAKIEFKNKYSPRK
>Mature_196_residues
MVGKSLSEMSLEELWMLFPIILEEHNPMWKEWYLEEEKLIISSIGNHNIERINHIGSTSVNGLIAKPTIDILLEITKDCD
LKFLVNMLEENGYIFENQPQKPAPHMMFMKGYTEKGFSEKVFHLHVRYLGDWDELYFRDYLRSHTDISQAYGELKIALKD
KYEHNRDDYTEAKTEFIRKYTTIAKIEFKNKYSPRK

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0157 (GrpB) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007344 [H]

Pfam domain/function: PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 23348; Mature: 23348

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGKSLSEMSLEELWMLFPIILEEHNPMWKEWYLEEEKLIISSIGNHNIERINHIGSTSV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
NGLIAKPTIDILLEITKDCDLKFLVNMLEENGYIFENQPQKPAPHMMFMKGYTEKGFSEK
CCEEECCHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCCCCCCEEEECCCCCCCCCCC
VFHLHVRYLGDWDELYFRDYLRSHTDISQAYGELKIALKDKYEHNRDDYTEAKTEFIRKY
EEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHH
TTIAKIEFKNKYSPRK
HHHHEEEECCCCCCCC
>Mature Secondary Structure
MVGKSLSEMSLEELWMLFPIILEEHNPMWKEWYLEEEKLIISSIGNHNIERINHIGSTSV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
NGLIAKPTIDILLEITKDCDLKFLVNMLEENGYIFENQPQKPAPHMMFMKGYTEKGFSEK
CCEEECCHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCCCCCCEEEECCCCCCCCCCC
VFHLHVRYLGDWDELYFRDYLRSHTDISQAYGELKIALKDKYEHNRDDYTEAKTEFIRKY
EEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHH
TTIAKIEFKNKYSPRK
HHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]