Click here to switch to the map view.

The map label for this gene is lipA [H]

Identifier: 226948134

GI number: 226948134

Start: 1058806

End: 1060248

Strand: Direct

Name: lipA [H]

Synonym: CLM_1002

Alternate gene names: 226948134

Gene position: 1058806-1060248 (Clockwise)

Preceding gene: 226948133

Following gene: 226948138

Centisome position: 25.48

GC content: 31.81

Gene sequence:

>1443_bases
ATGAAAAAAAATTTAAACAAAATAGCAACTATTATTTTATTAGTGTTTTCTATGACACTAACAAATTTTTCAATGATTGT
AAGAGCAGCTGAACCAAAGGCACAAGGAACACATAAGGTGGAATCATCTACTACTAAAAAAGAAGTAAAAGATGCAGAGG
AGACAATAAAAATACCTACATTAGAAGATATAGACAATTTGATAGATTTGGCAGAAGAAGTTAAAAGTGAAGAAGATATA
AATAAAATGCCTCCATTAAAGTTTCCAGTGGAATTTCCAGAAGTTAATACTAGGAGTATTATAGGGGGAAATAATTATCC
AATTGTTTTAGTTCATGGTTTTATGGGCTTTGGAAGAGATGAATTATTAGGATATAAATATTGGGGTGGAGTAGTTGATC
TTCAAGAAAAGTTAAATGCCTCAGGACATGAGACTTATACAGCAACAGTAGGTCCAGTATCTAGTAACTGGGATAGAGCT
TGTGAACTTTACGCTTATATAGTAGGTGGAACAGTAGATTATGGAGAAGCTCATGCAAAAAAATTTAAGCATAATAGATA
TGGAAGGACATATCCAGGTATATATAAAAATATAAGCAATGAAAATAAAATACATTTAATAGGTCATAGTATGGGTGGAC
AAACTGTACGTACACTTACACAGTTGTTAAGTGAAGGAAGCGAAGAGGAAATAAATTGTGGACAAGAAAATATTTCACCA
TTATTTGAAGGTGGAAAGCATTGGATTCATAGTGTTAGTACGATCTCTACACCTAATGATGGTACAACTTTATCAGATTT
AATGCCAGCAAAAGATTTAATAAGTTATACATTTGGTGTATTAGGAACAATAACTGGTAAAAACAATTTATTTAGCTCAA
TATATGATTTAAAATTAGATCAATGGGGATTAAAGAAGCAAGATGGAGAATCTCAACGTGATTATATTGAAAGGGTTTTG
GAAAGCAATATTTGGGATAGTACAAAGGATATATCAATTTATGATTTATCCACAGAAGGTGCACAAGAGCTCAATACATG
GGTAAAGGCTCAACCAGATGTATATTATTTTTCTTGGACAACGCAAGCAACTACAGAATCTATACTTACAGGTCATTCTG
TAGCACAAATTGGTCCAATGAATCCTATATTTTATCCAACAGCAAACTTAATGGGAAAATATTCACGTAACCAAAAAGAT
CTTCCTATCATTGATAAGAAATGGTTCCCAAATGATGGGGTTGTAAATTGTATTAGTCAAGATGGACCTAAATTAGGTTC
TAATGATGTTATTGAAAAATACAATGGTGGAGTTAAAATAGGACAATGGAATGCAATGCCTAGAATCATAAATACAGATC
ATATGGATATAGTAGGCACATTTGGTAACGTTAAAGACTGGTATATAGATTACGCAAGCTTTTTAAGTAATTTGTCAAGA
TAA

Upstream 100 bases:

>100_bases
ATTATCAATTATTACAATAAAATGAGAGGGGGTTTAAGGGAAAAAATGATTTATTCAGTCATAATAGTTACTTAAAAATT
GAATTAAGGGGAGATGTGAA

Downstream 100 bases:

>100_bases
ATAGATGAAATAATAAGATAAAATTAGCTTATCATACTTATGATAAGCTAGTTTTTTATACTAAAATTTACGAAGTTTTT
TCTTTCTAGCAATCCCTAGC

Product: triacylglycerol lipase

Products: NA

Alternate protein names: Glycerol ester hydrolase 1 [H]

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MKKNLNKIATIILLVFSMTLTNFSMIVRAAEPKAQGTHKVESSTTKKEVKDAEETIKIPTLEDIDNLIDLAEEVKSEEDI
NKMPPLKFPVEFPEVNTRSIIGGNNYPIVLVHGFMGFGRDELLGYKYWGGVVDLQEKLNASGHETYTATVGPVSSNWDRA
CELYAYIVGGTVDYGEAHAKKFKHNRYGRTYPGIYKNISNENKIHLIGHSMGGQTVRTLTQLLSEGSEEEINCGQENISP
LFEGGKHWIHSVSTISTPNDGTTLSDLMPAKDLISYTFGVLGTITGKNNLFSSIYDLKLDQWGLKKQDGESQRDYIERVL
ESNIWDSTKDISIYDLSTEGAQELNTWVKAQPDVYYFSWTTQATTESILTGHSVAQIGPMNPIFYPTANLMGKYSRNQKD
LPIIDKKWFPNDGVVNCISQDGPKLGSNDVIEKYNGGVKIGQWNAMPRIINTDHMDIVGTFGNVKDWYIDYASFLSNLSR

Sequences:

>Translated_480_residues
MKKNLNKIATIILLVFSMTLTNFSMIVRAAEPKAQGTHKVESSTTKKEVKDAEETIKIPTLEDIDNLIDLAEEVKSEEDI
NKMPPLKFPVEFPEVNTRSIIGGNNYPIVLVHGFMGFGRDELLGYKYWGGVVDLQEKLNASGHETYTATVGPVSSNWDRA
CELYAYIVGGTVDYGEAHAKKFKHNRYGRTYPGIYKNISNENKIHLIGHSMGGQTVRTLTQLLSEGSEEEINCGQENISP
LFEGGKHWIHSVSTISTPNDGTTLSDLMPAKDLISYTFGVLGTITGKNNLFSSIYDLKLDQWGLKKQDGESQRDYIERVL
ESNIWDSTKDISIYDLSTEGAQELNTWVKAQPDVYYFSWTTQATTESILTGHSVAQIGPMNPIFYPTANLMGKYSRNQKD
LPIIDKKWFPNDGVVNCISQDGPKLGSNDVIEKYNGGVKIGQWNAMPRIINTDHMDIVGTFGNVKDWYIDYASFLSNLSR
>Mature_480_residues
MKKNLNKIATIILLVFSMTLTNFSMIVRAAEPKAQGTHKVESSTTKKEVKDAEETIKIPTLEDIDNLIDLAEEVKSEEDI
NKMPPLKFPVEFPEVNTRSIIGGNNYPIVLVHGFMGFGRDELLGYKYWGGVVDLQEKLNASGHETYTATVGPVSSNWDRA
CELYAYIVGGTVDYGEAHAKKFKHNRYGRTYPGIYKNISNENKIHLIGHSMGGQTVRTLTQLLSEGSEEEINCGQENISP
LFEGGKHWIHSVSTISTPNDGTTLSDLMPAKDLISYTFGVLGTITGKNNLFSSIYDLKLDQWGLKKQDGESQRDYIERVL
ESNIWDSTKDISIYDLSTEGAQELNTWVKAQPDVYYFSWTTQATTESILTGHSVAQIGPMNPIFYPTANLMGKYSRNQKD
LPIIDKKWFPNDGVVNCISQDGPKLGSNDVIEKYNGGVKIGQWNAMPRIINTDHMDIVGTFGNVKDWYIDYASFLSNLSR

Specific function: Unknown

COG id: COG1075

COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005877 [H]

Pfam domain/function: PF04650 YSIRK_signal [H]

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 53715; Mature: 53715

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00120 LIPASE_SER ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLNKIATIILLVFSMTLTNFSMIVRAAEPKAQGTHKVESSTTKKEVKDAEETIKIPT
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LEDIDNLIDLAEEVKSEEDINKMPPLKFPVEFPEVNTRSIIGGNNYPIVLVHGFMGFGRD
HHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCHH
ELLGYKYWGGVVDLQEKLNASGHETYTATVGPVSSNWDRACELYAYIVGGTVDYGEAHAK
HHCCCHHCCCCEEHHHHCCCCCCCEEEEEECCCCCCHHHHHEEEEEEECCCCCCCHHHHH
KFKHNRYGRTYPGIYKNISNENKIHLIGHSMGGQTVRTLTQLLSEGSEEEINCGQENISP
HHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
LFEGGKHWIHSVSTISTPNDGTTLSDLMPAKDLISYTFGVLGTITGKNNLFSSIYDLKLD
HHHCCHHHHHHHHEECCCCCCCCHHHHCCHHHHHHHHHHHHEEECCCCHHHHHHHHHCCC
QWGLKKQDGESQRDYIERVLESNIWDSTKDISIYDLSTEGAQELNTWVKAQPDVYYFSWT
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEE
TQATTESILTGHSVAQIGPMNPIFYPTANLMGKYSRNQKDLPIIDKKWFPNDGVVNCISQ
CHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCCCEEEEECC
DGPKLGSNDVIEKYNGGVKIGQWNAMPRIINTDHMDIVGTFGNVKDWYIDYASFLSNLSR
CCCCCCCCHHHHHCCCCEEEECCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKNLNKIATIILLVFSMTLTNFSMIVRAAEPKAQGTHKVESSTTKKEVKDAEETIKIPT
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LEDIDNLIDLAEEVKSEEDINKMPPLKFPVEFPEVNTRSIIGGNNYPIVLVHGFMGFGRD
HHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCHH
ELLGYKYWGGVVDLQEKLNASGHETYTATVGPVSSNWDRACELYAYIVGGTVDYGEAHAK
HHCCCHHCCCCEEHHHHCCCCCCCEEEEEECCCCCCHHHHHEEEEEEECCCCCCCHHHHH
KFKHNRYGRTYPGIYKNISNENKIHLIGHSMGGQTVRTLTQLLSEGSEEEINCGQENISP
HHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
LFEGGKHWIHSVSTISTPNDGTTLSDLMPAKDLISYTFGVLGTITGKNNLFSSIYDLKLD
HHHCCHHHHHHHHEECCCCCCCCHHHHCCHHHHHHHHHHHHEEECCCCHHHHHHHHHCCC
QWGLKKQDGESQRDYIERVLESNIWDSTKDISIYDLSTEGAQELNTWVKAQPDVYYFSWT
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEE
TQATTESILTGHSVAQIGPMNPIFYPTANLMGKYSRNQKDLPIIDKKWFPNDGVVNCISQ
CHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCCCEEEEECC
DGPKLGSNDVIEKYNGGVKIGQWNAMPRIINTDHMDIVGTFGNVKDWYIDYASFLSNLSR
CCCCCCCCHHHHHCCCCEEEECCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA