Click here to switch to the map view.

The map label for this gene is 226948027

Identifier: 226948027

GI number: 226948027

Start: 944084

End: 944311

Strand: Direct

Name: 226948027

Synonym: CLM_0888

Alternate gene names: NA

Gene position: 944084-944311 (Clockwise)

Preceding gene: 226948026

Following gene: 226948028

Centisome position: 22.72

GC content: 27.63

Gene sequence:

>228_bases
ATGAGTACAAAAAAATATTTAAATTTAGTCTTTAGAACTACAGAGGATTCTACTTCAACTATAAAAATTCCAAAGGTTAA
AGAGGATGTAACAGAAGAGGAAATAAAGAATTGTGGTAAAGCTATAGTAGACCAGAACATATTCCAAAATAAAAATGGAG
ATCTTTCAAGTCTTAAAGTTGCTAGGATTATAACAACAGATACAGAAGAAATTACAATAGAAGAATAA

Upstream 100 bases:

>100_bases
GTAGTGGATGCAATAAATCCATTGATACCAGAGGGCATATCAGAGGCTAGGGTAGTAGAAAATTATGTATTAATAAAATA
ATTAGGAGGGGGAATGTATC

Downstream 100 bases:

>100_bases
TTTAAAAAGCTCTCACATTGTGAGGGCTTTTTATAACTGAATTTTTAAGATTAGATGAAGTGTCATTAGAATAATTATTT
TTATTTGCTGGCTCAGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MSTKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKVARIITTDTEEITIEE

Sequences:

>Translated_75_residues
MSTKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKVARIITTDTEEITIEE
>Mature_74_residues
STKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKVARIITTDTEEITIEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8507; Mature: 8376

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKV
CCCHHEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEE
ARIITTDTEEITIEE
EEEEECCCCEEEECC
>Mature Secondary Structure 
STKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKV
CCHHEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEE
ARIITTDTEEITIEE
EEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA