| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226948026
Identifier: 226948026
GI number: 226948026
Start: 943843
End: 944064
Strand: Direct
Name: 226948026
Synonym: CLM_0887
Alternate gene names: NA
Gene position: 943843-944064 (Clockwise)
Preceding gene: 226948025
Following gene: 226948027
Centisome position: 22.71
GC content: 33.78
Gene sequence:
>222_bases ATGGCAGTAAGTAAAAATCTTTTAGAAAGAAATCTAGCTCTAGAATATCAAGATGGCTTAGATAAGAAAGGAAAGGCCAT CATGAAAAAGGCTACCTATAAAAATGTAAAACTAGCTGCAGAATCAGAAGCACTTATGGAGGTAGTGGATGCAATAAATC CATTGATACCAGAGGGCATATCAGAGGCTAGGGTAGTAGAAAATTATGTATTAATAAAATAA
Upstream 100 bases:
>100_bases AATATCCTCCTTTTATTGAAAAAATCACTGCAGTTTATACCTACTAGTCATATATATAGGTGAAAACAAAAACAAACAAA AAACAAGGAGGTAACAAACT
Downstream 100 bases:
>100_bases TTAGGAGGGGGAATGTATCATGAGTACAAAAAAATATTTAAATTTAGTCTTTAGAACTACAGAGGATTCTACTTCAACTA TAAAAATTCCAAAGGTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MAVSKNLLERNLALEYQDGLDKKGKAIMKKATYKNVKLAAESEALMEVVDAINPLIPEGISEARVVENYVLIK
Sequences:
>Translated_73_residues MAVSKNLLERNLALEYQDGLDKKGKAIMKKATYKNVKLAAESEALMEVVDAINPLIPEGISEARVVENYVLIK >Mature_72_residues AVSKNLLERNLALEYQDGLDKKGKAIMKKATYKNVKLAAESEALMEVVDAINPLIPEGISEARVVENYVLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8090; Mature: 7958
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSKNLLERNLALEYQDGLDKKGKAIMKKATYKNVKLAAESEALMEVVDAINPLIPEGI CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC SEARVVENYVLIK CHHHHHHHHEECC >Mature Secondary Structure AVSKNLLERNLALEYQDGLDKKGKAIMKKATYKNVKLAAESEALMEVVDAINPLIPEGI CCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC SEARVVENYVLIK CHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA