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The map label for this gene is 226948017

Identifier: 226948017

GI number: 226948017

Start: 938333

End: 938941

Strand: Reverse

Name: 226948017

Synonym: CLM_0878

Alternate gene names: NA

Gene position: 938941-938333 (Counterclockwise)

Preceding gene: 226948018

Following gene: 226948016

Centisome position: 22.6

GC content: 23.32

Gene sequence:

>609_bases
ATGGCTAATTATTATAAAAACAATTATTATACTTTAGATAAAATCCCTAAGCATAGGATTGAGTATATAACTAAAAGTGT
AAAAATATTTTTAAAGGATTTTAATTTAAAACATTGGCCTCTAGATTGCGTTGAACTTATATTAAAAATTCAAAAAGATC
AAAGTTTACCTATACAAATAAAATCAATGGCTAATTTACCTCATAATTTTGACGCAGCTACAATATATTCAAAAGAAAGT
AATAGTTTTCTAATAATTGTTAATAGAAATAAAATTCATTATCCATTTAAAATTTCTAAACACCGTAGACTTAACTTTAC
ATTAGCTCATGAACTAGGTCATATTTATTTAAAACATCATGAATTACCGGAAAACTGTAAAACAGAAAAGGATTTATATA
TAGAAGAATTAGAAGCTGACGAATTTGCTGGAAAAATACTTATGCCTAAAAATAAAATATACACCAGTAATTTTACATCT
ATTAAAGAAGTTGCAACATATTTTAATGTTTCAGAGAGTGCTGTACTAAAAAGATTAACCAATATTAAATGTTCTAATTT
AACATATTCAAGACTTAAAAACTATGAAAATATAAAAATACATTTCTAA

Upstream 100 bases:

>100_bases
ATAAATAATTATTTGTTCTTGTTTTTCCTTTACTTGGTAATAATTTCATATTATAATATAATTACGGAACGTTTGTTCTT
TTATAATATGGAGGTATAGC

Downstream 100 bases:

>100_bases
AGATACTTATTACAAAATTTATGGAGCATTTCTTTAAAATAAATTAAAAAGCTTACAATTATAAATTATAATGATACTAA
AATTGTTTTTAATGCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MANYYKNNYYTLDKIPKHRIEYITKSVKIFLKDFNLKHWPLDCVELILKIQKDQSLPIQIKSMANLPHNFDAATIYSKES
NSFLIIVNRNKIHYPFKISKHRRLNFTLAHELGHIYLKHHELPENCKTEKDLYIEELEADEFAGKILMPKNKIYTSNFTS
IKEVATYFNVSESAVLKRLTNIKCSNLTYSRLKNYENIKIHF

Sequences:

>Translated_202_residues
MANYYKNNYYTLDKIPKHRIEYITKSVKIFLKDFNLKHWPLDCVELILKIQKDQSLPIQIKSMANLPHNFDAATIYSKES
NSFLIIVNRNKIHYPFKISKHRRLNFTLAHELGHIYLKHHELPENCKTEKDLYIEELEADEFAGKILMPKNKIYTSNFTS
IKEVATYFNVSESAVLKRLTNIKCSNLTYSRLKNYENIKIHF
>Mature_201_residues
ANYYKNNYYTLDKIPKHRIEYITKSVKIFLKDFNLKHWPLDCVELILKIQKDQSLPIQIKSMANLPHNFDAATIYSKESN
SFLIIVNRNKIHYPFKISKHRRLNFTLAHELGHIYLKHHELPENCKTEKDLYIEELEADEFAGKILMPKNKIYTSNFTSI
KEVATYFNVSESAVLKRLTNIKCSNLTYSRLKNYENIKIHF

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23989; Mature: 23858

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYYKNNYYTLDKIPKHRIEYITKSVKIFLKDFNLKHWPLDCVELILKIQKDQSLPIQI
CCCEECCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEE
KSMANLPHNFDAATIYSKESNSFLIIVNRNKIHYPFKISKHRRLNFTLAHELGHIYLKHH
EEHHCCCCCCCCEEEEECCCCCEEEEEECCEEECCEEECCCCEEEEEEEHHHCEEEEEEC
ELPENCKTEKDLYIEELEADEFAGKILMPKNKIYTSNFTSIKEVATYFNVSESAVLKRLT
CCCCCCCCCCCHHHHHCCHHHHCCEEECCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHH
NIKCSNLTYSRLKNYENIKIHF
CCEECCEEHHHHCCCCEEEEEC
>Mature Secondary Structure 
ANYYKNNYYTLDKIPKHRIEYITKSVKIFLKDFNLKHWPLDCVELILKIQKDQSLPIQI
CCEECCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEE
KSMANLPHNFDAATIYSKESNSFLIIVNRNKIHYPFKISKHRRLNFTLAHELGHIYLKHH
EEHHCCCCCCCCEEEEECCCCCEEEEEECCEEECCEEECCCCEEEEEEEHHHCEEEEEEC
ELPENCKTEKDLYIEELEADEFAGKILMPKNKIYTSNFTSIKEVATYFNVSESAVLKRLT
CCCCCCCCCCCHHHHHCCHHHHCCEEECCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHH
NIKCSNLTYSRLKNYENIKIHF
CCEECCEEHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA