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The map label for this gene is nifH [H]

Identifier: 226947949

GI number: 226947949

Start: 869606

End: 870355

Strand: Direct

Name: nifH [H]

Synonym: CLM_0807

Alternate gene names: 226947949

Gene position: 869606-870355 (Clockwise)

Preceding gene: 226947948

Following gene: 226947950

Centisome position: 20.93

GC content: 40.93

Gene sequence:

>750_bases
ATGAAGAAAATTGCTATTTATGGGAAAGGGGGCATTGGAAAGTCCACTACGGTATCCAATGTATCTGCAGCTATGGCAGA
AATGGGGCTTACAGTAATGCAAATTGGGTGTGACCCTAAGGCGGACTCTACTCGAAATCTAACCGGCGGTAAAAATATTC
CCACGGTATTGGATACTCTAAGAGAAAAGGGAGATATAGAGCTAGATGACCTTGTATTTAAAAGTAGTACTGGTGTCTTG
TGTGTAGAATCAGGAGGACCAGTTCCAGGAGTAGGCTGTGCCGGCCGTGGAATAATCACTGCATTTGAAAAACTGGAAGA
ATTAGATGCATATGAAGTATATAAACCAGATGTTATCCTCTATGATGTATTGGGTGATGTGGTATGCGGTGGATTTGCTA
TGCCTATTAGAGGAGGATATGCCGATGAGGTGTGTATAGTTACATCAGGGGAAATGATGTCGCTTTACGCAGCTACAAAT
ATTGCACATGCTGTTAAAAGTTTTGGTAAGCGTGGATATGCATCCCTACGAGGATTGATACTAAACTCTAAAAAAATCGA
AAATGAACAAGAGTTAGTTAGAAAAGTTGCAGAGGAAATTGAAACACCAGTAATTCACTCTATGGAACGAGATCCTTATG
TACAGAAAGCTGAAGCTTTAGGAAAAACTGTAGTTGAAGCCTTCCCAGAATGTGATATGGCAAAGCACTACGGTACTTTG
GCAAAGATTCTATTAGAGGGAGGGAAGTGA

Upstream 100 bases:

>100_bases
TTGATGCAGAAATTGTGTGGGGCTCCAAAATAGGGCGTCCTACATGTATTTCCTATGAATTGATTAAATAATAGAAATAG
TATTAAGAGGAGATGGTTAT

Downstream 100 bases:

>100_bases
TAATGGAGGAATTAAAACATCTAAAACACTTATCTTCAGTTAAAACAAATGCCGGGGTAAAATTTTTGACTCCCGCAGCT
TTCCCAGGAAATCATTGTCC

Product: nitrogenase iron protein

Products: NA

Alternate protein names: Nitrogenase Fe protein; Nitrogenase component II; Nitrogenase reductase [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKKIAIYGKGGIGKSTTVSNVSAAMAEMGLTVMQIGCDPKADSTRNLTGGKNIPTVLDTLREKGDIELDDLVFKSSTGVL
CVESGGPVPGVGCAGRGIITAFEKLEELDAYEVYKPDVILYDVLGDVVCGGFAMPIRGGYADEVCIVTSGEMMSLYAATN
IAHAVKSFGKRGYASLRGLILNSKKIENEQELVRKVAEEIETPVIHSMERDPYVQKAEALGKTVVEAFPECDMAKHYGTL
AKILLEGGK

Sequences:

>Translated_249_residues
MKKIAIYGKGGIGKSTTVSNVSAAMAEMGLTVMQIGCDPKADSTRNLTGGKNIPTVLDTLREKGDIELDDLVFKSSTGVL
CVESGGPVPGVGCAGRGIITAFEKLEELDAYEVYKPDVILYDVLGDVVCGGFAMPIRGGYADEVCIVTSGEMMSLYAATN
IAHAVKSFGKRGYASLRGLILNSKKIENEQELVRKVAEEIETPVIHSMERDPYVQKAEALGKTVVEAFPECDMAKHYGTL
AKILLEGGK
>Mature_249_residues
MKKIAIYGKGGIGKSTTVSNVSAAMAEMGLTVMQIGCDPKADSTRNLTGGKNIPTVLDTLREKGDIELDDLVFKSSTGVL
CVESGGPVPGVGCAGRGIITAFEKLEELDAYEVYKPDVILYDVLGDVVCGGFAMPIRGGYADEVCIVTSGEMMSLYAATN
IAHAVKSFGKRGYASLRGLILNSKKIENEQELVRKVAEEIETPVIHSMERDPYVQKAEALGKTVVEAFPECDMAKHYGTL
AKILLEGGK

Specific function: The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components:the iron protein and the molybdenum-iron protein [H]

COG id: COG1348

COG function: function code P; Nitrogenase subunit NifH (ATPase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NifH/BchL/ChlL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000392
- InterPro:   IPR005977 [H]

Pfam domain/function: PF00142 Fer4_NifH [H]

EC number: =1.18.6.1 [H]

Molecular weight: Translated: 26559; Mature: 26559

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAIYGKGGIGKSTTVSNVSAAMAEMGLTVMQIGCDPKADSTRNLTGGKNIPTVLDTL
CCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
REKGDIELDDLVFKSSTGVLCVESGGPVPGVGCAGRGIITAFEKLEELDAYEVYKPDVIL
HHCCCCCHHHEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCHH
YDVLGDVVCGGFAMPIRGGYADEVCIVTSGEMMSLYAATNIAHAVKSFGKRGYASLRGLI
HHHHHHHHHCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LNSKKIENEQELVRKVAEEIETPVIHSMERDPYVQKAEALGKTVVEAFPECDMAKHYGTL
CCCHHCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AKILLEGGK
HHHHHCCCC
>Mature Secondary Structure
MKKIAIYGKGGIGKSTTVSNVSAAMAEMGLTVMQIGCDPKADSTRNLTGGKNIPTVLDTL
CCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
REKGDIELDDLVFKSSTGVLCVESGGPVPGVGCAGRGIITAFEKLEELDAYEVYKPDVIL
HHCCCCCHHHEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCHH
YDVLGDVVCGGFAMPIRGGYADEVCIVTSGEMMSLYAATNIAHAVKSFGKRGYASLRGLI
HHHHHHHHHCCEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LNSKKIENEQELVRKVAEEIETPVIHSMERDPYVQKAEALGKTVVEAFPECDMAKHYGTL
CCCHHCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AKILLEGGK
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA