Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is fhuB [H]
Identifier: 226947946
GI number: 226947946
Start: 866483
End: 867523
Strand: Direct
Name: fhuB [H]
Synonym: CLM_0804
Alternate gene names: 226947946
Gene position: 866483-867523 (Clockwise)
Preceding gene: 226947945
Following gene: 226947947
Centisome position: 20.85
GC content: 37.56
Gene sequence:
>1041_bases ATGAAAAAACCAATGGAGAAGGTAAATATAAACATAAATAAAAAAGATCATATACGGAAGATGTGGTTTATTGTATTAGG AGGATTAGGATTACTTGCTTTTATTATGATGTTTTCTACAACTAAGGGGGCAGAGAATATCCCCTTAGCTTCCCTATGGG ATGCTTTATTTCATTTTAATGGGAAGGAAATGAATCATCTTGTTATAGTCAATCTACGTATTCCTCGTGTTATAGCAAGT GCCTTAGTTGGTGCAGCTCTTGCTGTTTCAGGAGCTATTATGCAAGGAACTACAGGAAATCCCCTTGCTGATTCAGGATT ATTAGGGTTAAATGCTGGAGCGGCTTTTGCTCTTTCTATATGTTTTGCCTTCTTTCCCGGAATGAAATATATCCATATTA TTTTATTTTCCTTTTTAGGAGCAGCTTTTGGAGCTGTATTAGTTAATGGTATTGCTTCTATGAAAAGAGGTGGACAAACA CCCATTAGGCTTGTATTGGCAGGGGCAGCTGTTAGTACATTACTTGTGGCTATGAGCCAGGGTATTGCTCTTTATTTTAA TGTAGCTCAAAGCATCATGTTTTGGACTGTTGGTGGTGTTGCAGGTTCTAATTGGGAACAGGTTAGGATAATGCTTCCGT GGATAATAGGAGGACTCATAGGAGCGGTGGCCCTATCACCTTATATTTCTATTTTAAGCTTAGGACAGGATGTTGCAAAG GGATTGGGAATAAATATAAAGGTAATAAATCTATTCTCTTCACTTATAGTTCTTATATTGGTAGGAGCTTCAGTATCTGT AGTGGGTTCAGTTGGATTTGTGGGATTGATTGTTCCTCATATTGCACGTTTTTTTGTTGGGATGGATTATAAACTAATTA TTCCTTCTACAGCAGTAATGGGAGCTTTGCTGGTAGTATTGGCTGACCTAGGAGCGAGAACTTTAAACCCTCCTTTTGAA ACTCCCATAGGAGCTATAATTTCTCTTATTGGTGTACCATTATTTTTAAATTTGGCTCGTAGGCAAAGGAGTGCAATATA A
Upstream 100 bases:
>100_bases AATAAACTTTCATTGGCAAATTAAATGTAATCTAAATGGAAGTTATCCATTGGTTTGGCATAATAAGAATAGTTTACAGT AATAAGGAGGTAGCAGTTAT
Downstream 100 bases:
>100_bases TGAAAGAACAACAACAAATAATTGAAGCATATAAACGTAAGGTAGCCATTCGTAATACATTAATTGTAATTGGATGCATT TTATTACTAGCAATTTCTTT
Product: ferrichrome transport system permease FhuB
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKKPMEKVNININKKDHIRKMWFIVLGGLGLLAFIMMFSTTKGAENIPLASLWDALFHFNGKEMNHLVIVNLRIPRVIAS ALVGAALAVSGAIMQGTTGNPLADSGLLGLNAGAAFALSICFAFFPGMKYIHIILFSFLGAAFGAVLVNGIASMKRGGQT PIRLVLAGAAVSTLLVAMSQGIALYFNVAQSIMFWTVGGVAGSNWEQVRIMLPWIIGGLIGAVALSPYISILSLGQDVAK GLGINIKVINLFSSLIVLILVGASVSVVGSVGFVGLIVPHIARFFVGMDYKLIIPSTAVMGALLVVLADLGARTLNPPFE TPIGAIISLIGVPLFLNLARRQRSAI
Sequences:
>Translated_346_residues MKKPMEKVNININKKDHIRKMWFIVLGGLGLLAFIMMFSTTKGAENIPLASLWDALFHFNGKEMNHLVIVNLRIPRVIAS ALVGAALAVSGAIMQGTTGNPLADSGLLGLNAGAAFALSICFAFFPGMKYIHIILFSFLGAAFGAVLVNGIASMKRGGQT PIRLVLAGAAVSTLLVAMSQGIALYFNVAQSIMFWTVGGVAGSNWEQVRIMLPWIIGGLIGAVALSPYISILSLGQDVAK GLGINIKVINLFSSLIVLILVGASVSVVGSVGFVGLIVPHIARFFVGMDYKLIIPSTAVMGALLVVLADLGARTLNPPFE TPIGAIISLIGVPLFLNLARRQRSAI >Mature_346_residues MKKPMEKVNININKKDHIRKMWFIVLGGLGLLAFIMMFSTTKGAENIPLASLWDALFHFNGKEMNHLVIVNLRIPRVIAS ALVGAALAVSGAIMQGTTGNPLADSGLLGLNAGAAFALSICFAFFPGMKYIHIILFSFLGAAFGAVLVNGIASMKRGGQT PIRLVLAGAAVSTLLVAMSQGIALYFNVAQSIMFWTVGGVAGSNWEQVRIMLPWIIGGLIGAVALSPYISILSLGQDVAK GLGINIKVINLFSSLIVLILVGASVSVVGSVGFVGLIVPHIARFFVGMDYKLIIPSTAVMGALLVVLADLGARTLNPPFE TPIGAIISLIGVPLFLNLARRQRSAI
Specific function: Part of the ABC transporter complex fhuBGCD involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790741, Length=292, Percent_Identity=36.3013698630137, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1786805, Length=302, Percent_Identity=34.1059602649007, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1790740, Length=295, Percent_Identity=30.8474576271186, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1786347, Length=355, Percent_Identity=30.7042253521127, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1788004, Length=292, Percent_Identity=32.5342465753425, Blast_Score=111, Evalue=9e-26, Organism=Escherichia coli, GI1786804, Length=306, Percent_Identity=31.0457516339869, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 36493; Mature: 36493
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPMEKVNININKKDHIRKMWFIVLGGLGLLAFIMMFSTTKGAENIPLASLWDALFHFN CCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC GKEMNHLVIVNLRIPRVIASALVGAALAVSGAIMQGTTGNPLADSGLLGLNAGAAFALSI CCCCCEEEEEEECHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCCCEECCCHHHHHHHH CFAFFPGMKYIHIILFSFLGAAFGAVLVNGIASMKRGGQTPIRLVLAGAAVSTLLVAMSQ HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC GIALYFNVAQSIMFWTVGGVAGSNWEQVRIMLPWIIGGLIGAVALSPYISILSLGQDVAK CHHHHHHHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGINIKVINLFSSLIVLILVGASVSVVGSVGFVGLIVPHIARFFVGMDYKLIIPSTAVM CCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHH GALLVVLADLGARTLNPPFETPIGAIISLIGVPLFLNLARRQRSAI HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKPMEKVNININKKDHIRKMWFIVLGGLGLLAFIMMFSTTKGAENIPLASLWDALFHFN CCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC GKEMNHLVIVNLRIPRVIASALVGAALAVSGAIMQGTTGNPLADSGLLGLNAGAAFALSI CCCCCEEEEEEECHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCCCEECCCHHHHHHHH CFAFFPGMKYIHIILFSFLGAAFGAVLVNGIASMKRGGQTPIRLVLAGAAVSTLLVAMSQ HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC GIALYFNVAQSIMFWTVGGVAGSNWEQVRIMLPWIIGGLIGAVALSPYISILSLGQDVAK CHHHHHHHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGINIKVINLFSSLIVLILVGASVSVVGSVGFVGLIVPHIARFFVGMDYKLIIPSTAVM CCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHH GALLVVLADLGARTLNPPFETPIGAIISLIGVPLFLNLARRQRSAI HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377; 8388528 [H]