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The map label for this gene is trg [C]

Identifier: 226947804

GI number: 226947804

Start: 708827

End: 710818

Strand: Direct

Name: trg [C]

Synonym: CLM_0654

Alternate gene names: 226947804

Gene position: 708827-710818 (Clockwise)

Preceding gene: 226947803

Following gene: 226947806

Centisome position: 17.06

GC content: 28.56

Gene sequence:

>1992_bases
ATGAAAAACAAAAGTATAAAACGTATAATTTCTACATTACTTATTTTTGTAGCCTTAATTCCTATATTAATTGTTGGGGT
GTATACTAATTATTCACAAACTAAAAGTTTAAAAAGTAATTTTGAATCATCAACTAAAAATTCCGTACTTAGTTTTAAAA
GTATGATAGCACAAAAAAATAAAAATAATATGGAATCAATTGGCACTTTAGTCAATGATGGTAATGCGAAAAATTTATTT
AAAAATAAGGACTCTGCTAATTGGCTCTTCTATGCACTAGAGGCTTTTAGAAGTTCTCATTCTGAAATTACTAATGTTTA
TCTAGGAACAGTTAAAGGAAATACTATATTTTCACCCAAAACTGATGTAGTTAATAGCATTGATCCAAGAACAAGACCTT
GGTATAAGAAGGCAGTTGAAATGAAAGGAGACCCTATTATTACAGAACCATACAAAGATACATCAGGTACCAATAGTCTA
ATGGTAACCATATCTAAAGCTGTTGTAGATGAGAAAGACTCTTTAGTTGGAGTAATTGGTATGGATATAAAATTAGATGA
TTTATCAACTATTGCTAAAAATACTAAGATTGGTAAAGATGGATTTGTGGCATTAGTTGATAAAAATGGTTCTATTATAG
GACATAAAGATAAAGAAAAATTAAATAAAAATATAAAAGATTTAAATTGGCCTAAAGAAATACTGAATAAGGGAATTATA
GATAAAGTAAAAATTGATGGAAAAGAGTATAAAGTTATAACAGAAAAAGATGGAGCAACATCCTGGAGCATTGTAGGATT
TTTACCTTATAGTGAGATACAATCTGAACTTAATAAATATTATAGAATGATAGTTATAATATCACTTTTATCTTTGGCAG
GAGCATTAGCAATAGGAGGACTATTCTCTAAAAAAATAATAAATCCTATAAGAAAAATAGAGGATGCATTAGCCTGTATG
AAGGATGGAGATTTTACTCAAAGCATAGATAAGGGCAAAACTTCAATTTATGAGATGGAATTAATTATGGACGGGATTAA
TATAGTGAGAGAAGAAACAGTAAAAATTTTAGATAGTCTTAAAAGTGTTTCTTCTGATGTAAAAGAGTCTTCAGATATTT
TAAAAAATATAACAGAGCAATCAGAAATGGCAGGAAATGAAATAGTACAAGTAGTACAAAATATAGCAGATGCAACTTCA
GATCAAGCTCAGTCTATGGAAGGAAGTTTAAACTCTATAAGTGATTTATCAGACAAAGTAGAAAATTCTATGGAAAATTC
TAAGGAAATGGTTAAAGAGTCTGATATAGTCAGAAATATTATAAAAGATAGTGGACAGGCTGTAAAAGGGCTAAAAAATA
AATTTGAATTGAACTCTAAATCAAATCAGGAATTAGCTAATAAAATTGATACATTAGCAGAAAGCTCAAATCAAATAAGT
ATAATAACAGAAACAATACAATCTATAACAGAACAAACCTCTTTATTAGCACTTAATGCTAGTATAGAATCTGCAAGGGC
AGGAGAAGCGGGAAAAGGATTTGCAGTAGTTGCAGAAGAGGTAAGGAAGCTTGCAGAACAATCCTCAACTTCAGCTTCAG
AAATAGAAAGAGTTATTTTTAACATAAATAAAGAAGTAAAAGATATACTAGATAAAATGTATGAAACTATAGAACTTGAA
AAGGATACTAAGGATAAAATTGATATTACAGACAATGCTTTTAATACTATAAGAAAATCTATAGATAAATTAGAGGAAAG
CATAAGAAATGTTAATGAATCACAAAAAATTATATATAATAATAAAAACGATATATTAAATAAAATAAATGAGGCATCCT
CTGTGTCAGAAGAGATAGCAGCAACTACTGAAGAAATAACTGCATCAGCGGAGGAACAAGCAGCGGGACTTAAAGAGGTA
GTAGGATCTGCAGAAAAATTAAATTCTTATTCAGATACATTAAATTCACTAGTAAAACAATTTAAGATATAA

Upstream 100 bases:

>100_bases
AATAAATTAACATCAATACTAAAAATTATGTTTAACTGTTAATTGTTTGTAGTATAATATAATATAAATTATCACAATTT
TTGTAAAACGGGGGGATTTT

Downstream 100 bases:

>100_bases
GTTTAAAAAAGCTGGCAATAATAATATTGCTGGCTTTTTTGCTCATAAAGTATTAAATAAGTTCCAATATGTTTTGAAAA
TAAAATAGATTTAATTTTAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKNKNNMESIGTLVNDGNAKNLF
KNKDSANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPKTDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSL
MVTISKAVVDEKDSLVGVIGMDIKLDDLSTIAKNTKIGKDGFVALVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGGLFSKKIINPIRKIEDALACM
KDGDFTQSIDKGKTSIYEMELIMDGINIVREETVKILDSLKSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATS
DQAQSMEGSLNSISDLSDKVENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIFNINKEVKDILDKMYETIELE
KDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYNNKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEV
VGSAEKLNSYSDTLNSLVKQFKI

Sequences:

>Translated_663_residues
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKNKNNMESIGTLVNDGNAKNLF
KNKDSANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPKTDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSL
MVTISKAVVDEKDSLVGVIGMDIKLDDLSTIAKNTKIGKDGFVALVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGGLFSKKIINPIRKIEDALACM
KDGDFTQSIDKGKTSIYEMELIMDGINIVREETVKILDSLKSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATS
DQAQSMEGSLNSISDLSDKVENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIFNINKEVKDILDKMYETIELE
KDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYNNKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEV
VGSAEKLNSYSDTLNSLVKQFKI
>Mature_663_residues
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKNKNNMESIGTLVNDGNAKNLF
KNKDSANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPKTDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSL
MVTISKAVVDEKDSLVGVIGMDIKLDDLSTIAKNTKIGKDGFVALVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGGLFSKKIINPIRKIEDALACM
KDGDFTQSIDKGKTSIYEMELIMDGINIVREETVKILDSLKSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATS
DQAQSMEGSLNSISDLSDKVENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIFNINKEVKDILDKMYETIELE
KDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYNNKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEV
VGSAEKLNSYSDTLNSLVKQFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=251, Percent_Identity=29.8804780876494, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI2367378, Length=257, Percent_Identity=26.0700389105058, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788194, Length=399, Percent_Identity=23.3082706766917, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788195, Length=185, Percent_Identity=31.8918918918919, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1789453, Length=71, Percent_Identity=53.5211267605634, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 73231; Mature: 73231

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00589 PTS_HPR_SER ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNNMESIGTLVNDGNAKNLFKNKDSANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPK
CCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHEEEEEECCCEECCCC
TDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSLMVTISKAVVDEKDSLVGVIG
HHHHHCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEEHHHHHCCCCCEEEEEE
MDIKLDDLSTIAKNTKIGKDGFVALVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
CCEEEHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCHHHHCCCCCCCCCHHHHHCCCCC
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGG
HHEEECCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSKKIINPIRKIEDALACMKDGDFTQSIDKGKTSIYEMELIMDGINIVREETVKILDSL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATSDQAQSMEGSLNSISDLSDKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHH
ENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCH
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIF
HHHHHHHHHHHHHHHEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
NINKEVKDILDKMYETIELEKDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYN
HCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
NKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEVVGSAEKLNSYSDTLNSLVKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
FKI
HCC
>Mature Secondary Structure
MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESSTKNSVLSFKSMIAQKN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNNMESIGTLVNDGNAKNLFKNKDSANWLFYALEAFRSSHSEITNVYLGTVKGNTIFSPK
CCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHEEEEEECCCEECCCC
TDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSLMVTISKAVVDEKDSLVGVIG
HHHHHCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEEHHHHHCCCCCEEEEEE
MDIKLDDLSTIAKNTKIGKDGFVALVDKNGSIIGHKDKEKLNKNIKDLNWPKEILNKGII
CCEEEHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCHHHHCCCCCCCCCHHHHHCCCCC
DKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYYRMIVIISLLSLAGALAIGG
HHEEECCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSKKIINPIRKIEDALACMKDGDFTQSIDKGKTSIYEMELIMDGINIVREETVKILDSL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADATSDQAQSMEGSLNSISDLSDKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHH
ENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELNSKSNQELANKIDTLAESSNQIS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCH
IITETIQSITEQTSLLALNASIESARAGEAGKGFAVVAEEVRKLAEQSSTSASEIERVIF
HHHHHHHHHHHHHHHEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
NINKEVKDILDKMYETIELEKDTKDKIDITDNAFNTIRKSIDKLEESIRNVNESQKIIYN
HCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
NKNDILNKINEASSVSEEIAATTEEITASAEEQAAGLKEVVGSAEKLNSYSDTLNSLVKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
FKI
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA