Click here to switch to the map view.

The map label for this gene is yfiN [H]

Identifier: 226947738

GI number: 226947738

Start: 632496

End: 633644

Strand: Direct

Name: yfiN [H]

Synonym: CLM_0587

Alternate gene names: 226947738

Gene position: 632496-633644 (Clockwise)

Preceding gene: 226947737

Following gene: 226947742

Centisome position: 15.22

GC content: 23.59

Gene sequence:

>1149_bases
ATGAGGGAAAGTTTATTAATAGTTTTTAATACGATAAAAGTAGCTATGAAGAAAAGGAGTACCATATGGATAACTTTTGT
ACTACCAATTATATTAGCAGTATTTATGATAATAATGAATACTAGTGGTGGAAGAGATATAAAAATTGGTATAAATAATA
AAGATACAGGAATAATATCTAAAAAATTAATAAAGTACGTAGAAAAAAGAGATAAATTTAAAATAGTAAACGTAGAAGAA
AAAGAAATAAATAATTCTATTTCAAAGGAAAAGGTAGATTGTGTAATAGTTATACCACAGAATTTTTCAGAAGAAGTATA
CAATAATAATATAAGAAAAATAAAAATAGTATCTATAAAAGGAGCTGAAGTTACGGGTTTATTAGAAAATTATTTAAATA
TATATATAGATAATTTAAAAATTATAGGTAACCTTCATAAGGGTGATAAAAAAAGTTTTAATGAATTTTATAATAAGACT
GAAAACGGAATACTTAAACTTAATGTAGAAAAAGTTAAAGATAAATCTAGAGAAAAAGAATTAAGCTATATAACTATAGG
AATGTTATTGATGTTTGTATTAACTTCCTCTTCTAATATAAGTAAGTTTATATTAGAAGAAAGAAAAAATAAAACCTATA
ATAGAATTGCAACAACTCCTGTAAGTCCTAAGCAATATATTTTGGGAAATATACTCTGCAATTTTATGTTTAGCTTAATT
CAAATAATTATAGTTATGATTATAGTAGACAAATATGTATTAAAAGAAAATCTTATGGGAAGTAAAAATCTTGTAATATT
TTTAATATTAATTATGTTTTCTATAGTTGCTATTTCTCTTAGTATATTTATAGTAACTATTTGTAAATCTTCATCAGAAG
CCTCTAATTTAAGTGTAATAGTTACAGTATTAAGCACCATGATAGGAGGAGGCTTTTGGGAGATAAAAATAATGCCAAAA
TTTATGCAGAATTTAGCTAGCTTTACACCACAAAAATGGGCTATTGATGCTATCTTTAAGATAAATACTGGAGCTAATTT
TAAAGATATAGGTATAAATATGCTAATTTTAATATTGTTTGCAGGTACATTTTTCATCATTACAGTATATAAGCTAAAAA
TGGGAAATAAGACAGAGGAGTTTATATAA

Upstream 100 bases:

>100_bases
ATAATGATTTAAGTTATAAAATTATAATTATAAATTTATCTATAGCATTTATATTTTTAATTATCTCCTCTTTAAATTTT
AGTAGAAGGGAGGCAATATA

Downstream 100 bases:

>100_bases
TTTAAAGAAAAAAGTCTAGGACCATATATTTGAAAAATAGGTTCCTAGACTTTAATAGTTTACTAGTATTATAGTTTTTA
TAATTTTATACATTATTTTT

Product: ABC-type multidrug transport system, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRESLLIVFNTIKVAMKKRSTIWITFVLPIILAVFMIIMNTSGGRDIKIGINNKDTGIISKKLIKYVEKRDKFKIVNVEE
KEINNSISKEKVDCVIVIPQNFSEEVYNNNIRKIKIVSIKGAEVTGLLENYLNIYIDNLKIIGNLHKGDKKSFNEFYNKT
ENGILKLNVEKVKDKSREKELSYITIGMLLMFVLTSSSNISKFILEERKNKTYNRIATTPVSPKQYILGNILCNFMFSLI
QIIIVMIIVDKYVLKENLMGSKNLVIFLILIMFSIVAISLSIFIVTICKSSSEASNLSVIVTVLSTMIGGGFWEIKIMPK
FMQNLASFTPQKWAIDAIFKINTGANFKDIGINMLILILFAGTFFIITVYKLKMGNKTEEFI

Sequences:

>Translated_382_residues
MRESLLIVFNTIKVAMKKRSTIWITFVLPIILAVFMIIMNTSGGRDIKIGINNKDTGIISKKLIKYVEKRDKFKIVNVEE
KEINNSISKEKVDCVIVIPQNFSEEVYNNNIRKIKIVSIKGAEVTGLLENYLNIYIDNLKIIGNLHKGDKKSFNEFYNKT
ENGILKLNVEKVKDKSREKELSYITIGMLLMFVLTSSSNISKFILEERKNKTYNRIATTPVSPKQYILGNILCNFMFSLI
QIIIVMIIVDKYVLKENLMGSKNLVIFLILIMFSIVAISLSIFIVTICKSSSEASNLSVIVTVLSTMIGGGFWEIKIMPK
FMQNLASFTPQKWAIDAIFKINTGANFKDIGINMLILILFAGTFFIITVYKLKMGNKTEEFI
>Mature_382_residues
MRESLLIVFNTIKVAMKKRSTIWITFVLPIILAVFMIIMNTSGGRDIKIGINNKDTGIISKKLIKYVEKRDKFKIVNVEE
KEINNSISKEKVDCVIVIPQNFSEEVYNNNIRKIKIVSIKGAEVTGLLENYLNIYIDNLKIIGNLHKGDKKSFNEFYNKT
ENGILKLNVEKVKDKSREKELSYITIGMLLMFVLTSSSNISKFILEERKNKTYNRIATTPVSPKQYILGNILCNFMFSLI
QIIIVMIIVDKYVLKENLMGSKNLVIFLILIMFSIVAISLSIFIVTICKSSSEASNLSVIVTVLSTMIGGGFWEIKIMPK
FMQNLASFTPQKWAIDAIFKINTGANFKDIGINMLILILFAGTFFIITVYKLKMGNKTEEFI

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 43502; Mature: 43502

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESLLIVFNTIKVAMKKRSTIWITFVLPIILAVFMIIMNTSGGRDIKIGINNKDTGIIS
CCCCEEEEEHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
KKLIKYVEKRDKFKIVNVEEKEINNSISKEKVDCVIVIPQNFSEEVYNNNIRKIKIVSIK
HHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCCEEEEECCCCCHHHHCCCCEEEEEEEEC
GAEVTGLLENYLNIYIDNLKIIGNLHKGDKKSFNEFYNKTENGILKLNVEKVKDKSREKE
CCHHHHHHHHHHHHEEECEEEEEECCCCCHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHH
LSYITIGMLLMFVLTSSSNISKFILEERKNKTYNRIATTPVSPKQYILGNILCNFMFSLI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHH
QIIIVMIIVDKYVLKENLMGSKNLVIFLILIMFSIVAISLSIFIVTICKSSSEASNLSVI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VTVLSTMIGGGFWEIKIMPKFMQNLASFTPQKWAIDAIFKINTGANFKDIGINMLILILF
HHHHHHHHCCCEEEEEEEHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
AGTFFIITVYKLKMGNKTEEFI
HHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MRESLLIVFNTIKVAMKKRSTIWITFVLPIILAVFMIIMNTSGGRDIKIGINNKDTGIIS
CCCCEEEEEHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
KKLIKYVEKRDKFKIVNVEEKEINNSISKEKVDCVIVIPQNFSEEVYNNNIRKIKIVSIK
HHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCCEEEEECCCCCHHHHCCCCEEEEEEEEC
GAEVTGLLENYLNIYIDNLKIIGNLHKGDKKSFNEFYNKTENGILKLNVEKVKDKSREKE
CCHHHHHHHHHHHHEEECEEEEEECCCCCHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHH
LSYITIGMLLMFVLTSSSNISKFILEERKNKTYNRIATTPVSPKQYILGNILCNFMFSLI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHH
QIIIVMIIVDKYVLKENLMGSKNLVIFLILIMFSIVAISLSIFIVTICKSSSEASNLSVI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VTVLSTMIGGGFWEIKIMPKFMQNLASFTPQKWAIDAIFKINTGANFKDIGINMLILILF
HHHHHHHHCCCEEEEEEEHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
AGTFFIITVYKLKMGNKTEEFI
HHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]