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The map label for this gene is yfiM [H]

Identifier: 226947737

GI number: 226947737

Start: 631378

End: 632496

Strand: Direct

Name: yfiM [H]

Synonym: CLM_0586

Alternate gene names: 226947737

Gene position: 631378-632496 (Clockwise)

Preceding gene: 226947736

Following gene: 226947738

Centisome position: 15.19

GC content: 23.5

Gene sequence:

>1119_bases
ATGAAATTTTTAAATATAGCTATTAATGAAATAAAAATTAATTTTAGAGATAAAAAAAGTATGATAATGTTTATAATTTG
GCCTATGATGCTTATTACAGTGCTAGGATTTTCTTTAAATAGTGCTTTTAATAAAATTGATTTATTCAAGGATACTAAAG
TCATATATACTATGAGAGAAGATACAAAGAATAAACAAGCATTTGAAGAATTTTTAGATATAATAAAAAAACAAGGAATA
GAAATTTATAAGGAAAATAATACAAAAATAGCTAAGGAGAAAGTTCAAAATAAAGAGTATATTTGTTATTTGAATTTTCA
TAAAGAGGGTAATAAAATTGATTTTTATAAAAATGATAAATATAGTTCGCAGGCTTCAGTAGTAGAGGTAATAGCAAATA
GCTTTATTAAAAAATATAATACGGTGGTAGAGGTAATAAAAATAAATCCCACACTTATTAAGAAAGATAAAATAAATAAA
TATGTAGAAATAGAATCATTAGAAAATAAAAAAACTCCTAGTTCTTTGGAATATTATGCTGTAGCTATGATAGTAATGAT
AATTCTATATATATCCTTAGCAGCAGTGAATTCTTTTGGCAATGAATATACTAGAAATACTATAATTAAGTTAACTTCTT
CTCCTGCCTCAAAGCATGAGATATTCATAGGAAAAGTATTAGGGCTAACTTTTGTATCTGTAATACAAATCATATTGGTA
TTTTTATTTAGCAAATATGCATTAAAAGTGTATTGGGGGAAAAGTGAAGGAATAATACTTTTAGTTTTACTATCAGAAAT
AATTATGGCTATATTTGCAGGAATATCTATAATATATTTATTCAAAAAACAAAGTGTAGCAGAATCATTTTTAAATGGTA
TATTGCCCTTTATAACATTTTTGGGAGGAGGATATACACCTATGGATTTTCAGGAGAGCAAAGTATTAGAATTGATTTAT
GATTCTAATATATTCAGCAAGATTAAGGATGCTATATTTAATAGTATGTTTTTTAATAATAATGATTTAAGTTATAAAAT
TATAATTATAAATTTATCTATAGCATTTATATTTTTAATTATCTCCTCTTTAAATTTTAGTAGAAGGGAGGCAATATAA

Upstream 100 bases:

>100_bases
AAAATATCCCTATTAAAAATGTTGAAACTAAAAATCCGGATTTAGAAACCGTATTTTTAAGTTTAACAGGAAGAAAATTA
AGAGATTAAAGGTGAGGAAA

Downstream 100 bases:

>100_bases
TGAGGGAAAGTTTATTAATAGTTTTTAATACGATAAAAGTAGCTATGAAGAAAAGGAGTACCATATGGATAACTTTTGTA
CTACCAATTATATTAGCAGT

Product: multidrug ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKFLNIAINEIKINFRDKKSMIMFIIWPMMLITVLGFSLNSAFNKIDLFKDTKVIYTMREDTKNKQAFEEFLDIIKKQGI
EIYKENNTKIAKEKVQNKEYICYLNFHKEGNKIDFYKNDKYSSQASVVEVIANSFIKKYNTVVEVIKINPTLIKKDKINK
YVEIESLENKKTPSSLEYYAVAMIVMIILYISLAAVNSFGNEYTRNTIIKLTSSPASKHEIFIGKVLGLTFVSVIQIILV
FLFSKYALKVYWGKSEGIILLVLLSEIIMAIFAGISIIYLFKKQSVAESFLNGILPFITFLGGGYTPMDFQESKVLELIY
DSNIFSKIKDAIFNSMFFNNNDLSYKIIIINLSIAFIFLIISSLNFSRREAI

Sequences:

>Translated_372_residues
MKFLNIAINEIKINFRDKKSMIMFIIWPMMLITVLGFSLNSAFNKIDLFKDTKVIYTMREDTKNKQAFEEFLDIIKKQGI
EIYKENNTKIAKEKVQNKEYICYLNFHKEGNKIDFYKNDKYSSQASVVEVIANSFIKKYNTVVEVIKINPTLIKKDKINK
YVEIESLENKKTPSSLEYYAVAMIVMIILYISLAAVNSFGNEYTRNTIIKLTSSPASKHEIFIGKVLGLTFVSVIQIILV
FLFSKYALKVYWGKSEGIILLVLLSEIIMAIFAGISIIYLFKKQSVAESFLNGILPFITFLGGGYTPMDFQESKVLELIY
DSNIFSKIKDAIFNSMFFNNNDLSYKIIIINLSIAFIFLIISSLNFSRREAI
>Mature_372_residues
MKFLNIAINEIKINFRDKKSMIMFIIWPMMLITVLGFSLNSAFNKIDLFKDTKVIYTMREDTKNKQAFEEFLDIIKKQGI
EIYKENNTKIAKEKVQNKEYICYLNFHKEGNKIDFYKNDKYSSQASVVEVIANSFIKKYNTVVEVIKINPTLIKKDKINK
YVEIESLENKKTPSSLEYYAVAMIVMIILYISLAAVNSFGNEYTRNTIIKLTSSPASKHEIFIGKVLGLTFVSVIQIILV
FLFSKYALKVYWGKSEGIILLVLLSEIIMAIFAGISIIYLFKKQSVAESFLNGILPFITFLGGGYTPMDFQESKVLELIY
DSNIFSKIKDAIFNSMFFNNNDLSYKIIIINLSIAFIFLIISSLNFSRREAI

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42880; Mature: 42880

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLNIAINEIKINFRDKKSMIMFIIWPMMLITVLGFSLNSAFNKIDLFKDTKVIYTMRE
CCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
DTKNKQAFEEFLDIIKKQGIEIYKENNTKIAKEKVQNKEYICYLNFHKEGNKIDFYKNDK
CCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCEEEEEEEECCCCEEEEEECCC
YSSQASVVEVIANSFIKKYNTVVEVIKINPTLIKKDKINKYVEIESLENKKTPSSLEYYA
CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEHHHCCCEEEEECCCCCCCCCHHHHHH
VAMIVMIILYISLAAVNSFGNEYTRNTIIKLTSSPASKHEIFIGKVLGLTFVSVIQIILV
HHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
FLFSKYALKVYWGKSEGIILLVLLSEIIMAIFAGISIIYLFKKQSVAESFLNGILPFITF
HHHHHHEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGGYTPMDFQESKVLELIYDSNIFSKIKDAIFNSMFFNNNDLSYKIIIINLSIAFIFLI
HCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHH
ISSLNFSRREAI
HHHCCCHHHCCC
>Mature Secondary Structure
MKFLNIAINEIKINFRDKKSMIMFIIWPMMLITVLGFSLNSAFNKIDLFKDTKVIYTMRE
CCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
DTKNKQAFEEFLDIIKKQGIEIYKENNTKIAKEKVQNKEYICYLNFHKEGNKIDFYKNDK
CCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCEEEEEEEECCCCEEEEEECCC
YSSQASVVEVIANSFIKKYNTVVEVIKINPTLIKKDKINKYVEIESLENKKTPSSLEYYA
CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEHHHCCCEEEEECCCCCCCCCHHHHHH
VAMIVMIILYISLAAVNSFGNEYTRNTIIKLTSSPASKHEIFIGKVLGLTFVSVIQIILV
HHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
FLFSKYALKVYWGKSEGIILLVLLSEIIMAIFAGISIIYLFKKQSVAESFLNGILPFITF
HHHHHHEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGGYTPMDFQESKVLELIYDSNIFSKIKDAIFNSMFFNNNDLSYKIIIINLSIAFIFLI
HCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHH
ISSLNFSRREAI
HHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]