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The map label for this gene is ypjC [H]

Identifier: 226947711

GI number: 226947711

Start: 604820

End: 605671

Strand: Direct

Name: ypjC [H]

Synonym: CLM_0558

Alternate gene names: 226947711

Gene position: 604820-605671 (Clockwise)

Preceding gene: 226947710

Following gene: 226947713

Centisome position: 14.56

GC content: 28.99

Gene sequence:

>852_bases
ATGCATTTTAAAAAAGAAAATGTAAAAAGGTTAATTTTAGTAATAATGGGAAGTTTAATATATGCCATAGGAGTTAATAT
GTTTCTTATACCACATAAATTACTAAGTGGTGGAGTTGCTGGTATTGCAATAATGTTACAATATTTAACTAATATACAAT
CAGGATATTATATTCTTCTTATAAATATACCTATATTTCTTATAGCTTTTAAAGAAGTGGATTTAGATTTTGGGATTTTT
AGCTTTGTAGGAATGATAAGCATGTCTTCATTTTTAATTTTAAGTAGAAATTATATGGACTTTTATGCTATGAATGATAT
TTTAATTTCTTGTATATGCGGTGGTGTTTTAAGTGGAGCTGGTATGGGATTAATATTTAGAAATAGAGCTTCACAAGGAG
GAACAGATGTAATATCTGTTTTAGTAAAAAGAAAATTTGGAATAAAAATATCAACTATAGATTTTATGATAAACTGTGTA
GTAGTTACTATAGGAGCATTAATAGGAAGTTTCGAAGTAGCTGTTTATACAATGATATCTATGTTTGTAAAGTCACAGGT
TATGGGAAAAGTTATAGAAGGTTTTGATGGCAAGAAGATACTATTTGTTGTAACAGACCATGACGCGGAAATAAAAAAAC
AACTGGTAGAAAGATTAGGGGTAGGTGCAACTATTATGTATGGTGAAGGCGCTTATTCTGGAGCAAAAAGAAAAATAATA
TATTGTATTATGACTACCCAACAAATAGTAAAAGCTAAAAAGATAATAGAAGATTTTGATGAACATGCATTGATATCTGT
ATCTAATACTACGGAATGCCAAGGTGGAGGTTTTAAAGCAGCGGCCTTTTAA

Upstream 100 bases:

>100_bases
AAATAATTACTAATAAAAATATTTTTTAAAAGAATGAACATATAAATTTATATGTTATAGTAAAAAAAGTCTAATTTTGT
TTTGGAGGTTTTTATTTATC

Downstream 100 bases:

>100_bases
AAATAAAAAAATAATAAGATTAATTGTTAATTGAGAAAATAATAAGGGTTTATATTAAAATTTTTTAATATAAACCCTTA
TTTTTTACCTTTAATTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MHFKKENVKRLILVIMGSLIYAIGVNMFLIPHKLLSGGVAGIAIMLQYLTNIQSGYYILLINIPIFLIAFKEVDLDFGIF
SFVGMISMSSFLILSRNYMDFYAMNDILISCICGGVLSGAGMGLIFRNRASQGGTDVISVLVKRKFGIKISTIDFMINCV
VVTIGALIGSFEVAVYTMISMFVKSQVMGKVIEGFDGKKILFVVTDHDAEIKKQLVERLGVGATIMYGEGAYSGAKRKII
YCIMTTQQIVKAKKIIEDFDEHALISVSNTTECQGGGFKAAAF

Sequences:

>Translated_283_residues
MHFKKENVKRLILVIMGSLIYAIGVNMFLIPHKLLSGGVAGIAIMLQYLTNIQSGYYILLINIPIFLIAFKEVDLDFGIF
SFVGMISMSSFLILSRNYMDFYAMNDILISCICGGVLSGAGMGLIFRNRASQGGTDVISVLVKRKFGIKISTIDFMINCV
VVTIGALIGSFEVAVYTMISMFVKSQVMGKVIEGFDGKKILFVVTDHDAEIKKQLVERLGVGATIMYGEGAYSGAKRKII
YCIMTTQQIVKAKKIIEDFDEHALISVSNTTECQGGGFKAAAF
>Mature_283_residues
MHFKKENVKRLILVIMGSLIYAIGVNMFLIPHKLLSGGVAGIAIMLQYLTNIQSGYYILLINIPIFLIAFKEVDLDFGIF
SFVGMISMSSFLILSRNYMDFYAMNDILISCICGGVLSGAGMGLIFRNRASQGGTDVISVLVKRKFGIKISTIDFMINCV
VVTIGALIGSFEVAVYTMISMFVKSQVMGKVIEGFDGKKILFVVTDHDAEIKKQLVERLGVGATIMYGEGAYSGAKRKII
YCIMTTQQIVKAKKIIEDFDEHALISVSNTTECQGGGFKAAAF

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 31035; Mature: 31035

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFKKENVKRLILVIMGSLIYAIGVNMFLIPHKLLSGGVAGIAIMLQYLTNIQSGYYILL
CCCCHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
INIPIFLIAFKEVDLDFGIFSFVGMISMSSFLILSRNYMDFYAMNDILISCICGGVLSGA
EECCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GMGLIFRNRASQGGTDVISVLVKRKFGIKISTIDFMINCVVVTIGALIGSFEVAVYTMIS
CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFVKSQVMGKVIEGFDGKKILFVVTDHDAEIKKQLVERLGVGATIMYGEGAYSGAKRKII
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEE
YCIMTTQQIVKAKKIIEDFDEHALISVSNTTECQGGGFKAAAF
EEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCC
>Mature Secondary Structure
MHFKKENVKRLILVIMGSLIYAIGVNMFLIPHKLLSGGVAGIAIMLQYLTNIQSGYYILL
CCCCHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
INIPIFLIAFKEVDLDFGIFSFVGMISMSSFLILSRNYMDFYAMNDILISCICGGVLSGA
EECCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GMGLIFRNRASQGGTDVISVLVKRKFGIKISTIDFMINCVVVTIGALIGSFEVAVYTMIS
CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFVKSQVMGKVIEGFDGKKILFVVTDHDAEIKKQLVERLGVGATIMYGEGAYSGAKRKII
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEE
YCIMTTQQIVKAKKIIEDFDEHALISVSNTTECQGGGFKAAAF
EEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]