Click here to switch to the map view.

The map label for this gene is 226947703

Identifier: 226947703

GI number: 226947703

Start: 596143

End: 596667

Strand: Direct

Name: 226947703

Synonym: CLM_0550

Alternate gene names: NA

Gene position: 596143-596667 (Clockwise)

Preceding gene: 226947702

Following gene: 226947704

Centisome position: 14.35

GC content: 28.19

Gene sequence:

>525_bases
ATGGTACAATCAAAAAATAAGCAATTGGTTAGAGGGGCATTATTAATAGCAGTAGGGTTATTATTGCCTTATTTGTTTCA
TGGAATAAAAAATGCAGGATCAATATTTTTACCAATGCATATTCCAATTCTTATAGCAGGTTTTATATTGAGTCCTTATT
TTGCTTTAGCAGTAGGAGTATTAACTCCCTTATTGAGTCATTTATTTACAGGTATGCCACCATTCCCATTTGTCTATGTA
ATGGTAGTTGAATTATTAACTTATGGGGTGGTTATATCAATTTTATATAATAAAAAGAAAATGGGAATATATCCATCATT
AATAATAGGAATGTTAAGTGGAAGATTGGCTAATATATTATGTAATTATTTAGTTTTACATTTAATAATGGCAAAACCTT
TTAAATTTCCAATTGTATTAGCAGGGTTATTTGTAAAAGGTTTGCCGGGTATAGTTATTCAATTAATACTTATACCTATA
TTAGTTAAATCATTAGGGAAAGTAGAATTAGGAAAGGCTGTATAA

Upstream 100 bases:

>100_bases
AATTTTAAAGAAAGGAATGCATATTTCCTTACTTTGAAGACGTGGCATACTTCTTGCTGCTATTTAATAATAGGCATTAT
TCTTAGCAGGAGGTATTTAT

Downstream 100 bases:

>100_bases
TATGAATGATAAAGAGTTTTTTAATAATTTAGCAGATAAGTGGGACGATATGTGTTTTCATTCAAAAGAGAAAATAGAAT
ATATTCTTTCAAAAGCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MVQSKNKQLVRGALLIAVGLLLPYLFHGIKNAGSIFLPMHIPILIAGFILSPYFALAVGVLTPLLSHLFTGMPPFPFVYV
MVVELLTYGVVISILYNKKKMGIYPSLIIGMLSGRLANILCNYLVLHLIMAKPFKFPIVLAGLFVKGLPGIVIQLILIPI
LVKSLGKVELGKAV

Sequences:

>Translated_174_residues
MVQSKNKQLVRGALLIAVGLLLPYLFHGIKNAGSIFLPMHIPILIAGFILSPYFALAVGVLTPLLSHLFTGMPPFPFVYV
MVVELLTYGVVISILYNKKKMGIYPSLIIGMLSGRLANILCNYLVLHLIMAKPFKFPIVLAGLFVKGLPGIVIQLILIPI
LVKSLGKVELGKAV
>Mature_174_residues
MVQSKNKQLVRGALLIAVGLLLPYLFHGIKNAGSIFLPMHIPILIAGFILSPYFALAVGVLTPLLSHLFTGMPPFPFVYV
MVVELLTYGVVISILYNKKKMGIYPSLIIGMLSGRLANILCNYLVLHLIMAKPFKFPIVLAGLFVKGLPGIVIQLILIPI
LVKSLGKVELGKAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18934; Mature: 18934

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQSKNKQLVRGALLIAVGLLLPYLFHGIKNAGSIFLPMHIPILIAGFILSPYFALAVGV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
LTPLLSHLFTGMPPFPFVYVMVVELLTYGVVISILYNKKKMGIYPSLIIGMLSGRLANIL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHH
CNYLVLHLIMAKPFKFPIVLAGLFVKGLPGIVIQLILIPILVKSLGKVELGKAV
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MVQSKNKQLVRGALLIAVGLLLPYLFHGIKNAGSIFLPMHIPILIAGFILSPYFALAVGV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
LTPLLSHLFTGMPPFPFVYVMVVELLTYGVVISILYNKKKMGIYPSLIIGMLSGRLANIL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHH
CNYLVLHLIMAKPFKFPIVLAGLFVKGLPGIVIQLILIPILVKSLGKVELGKAV
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA