Click here to switch to the map view.

The map label for this gene is yuxH [H]

Identifier: 226947684

GI number: 226947684

Start: 576931

End: 578142

Strand: Reverse

Name: yuxH [H]

Synonym: CLM_0530

Alternate gene names: 226947684

Gene position: 578142-576931 (Counterclockwise)

Preceding gene: 226947685

Following gene: 226947682

Centisome position: 13.91

GC content: 23.35

Gene sequence:

>1212_bases
TTGGATACATTTGTTGCTAGACAACCTATTTTTGATATAAATGAAAATGTAGTAGCCTATGAATTGTTATTTAGAACTAA
TAATGAAAATAATGAATTTATAAATATAGATGGAGATATAGCAACCTCTAAAGTAATAATTAACAGCTTTCTATTAATTG
GTATAAAAAATTTAACTAATGGTAAAAAAGCTTTTATCAACTTTACAGAAAATCTTATTTTGGATGATATAGCCTCACTT
CTCCCAAAAGAATACGTAACAATAGAAATTCTAGAAAATGTAACTCCTTCTAAAGCTATAATATGTTCCTGTAAAAACCT
AAAACAAGAAGGATATACTATAGCATTAGATGATTTTGTCTTAATGGATAATTTAAAAGAATTAATAGAATTAGCGGATA
TTATAAAAATAGATTTTACTATTACTAAAGGTGATGAACGAAAAGAAATTATAGATAAAATACTTAAAATAAATAACAAA
ATAAAATTTCTAGCTGAAAAGATTGAAACTAGAGAAGAATTTACTGAAGCTGCTTCTATGGGATATTCTTTATTTCAAGG
GTATTTTTTTAGCAAGCCCACTATATTTAACGAAAGAGATATTCCTATACATAGCATTACCAAATATAAAATCTTAAAAG
AAATAAATAAAGAAGATATAGATTTTAACTATCTAGAAGAATTAATTAAAACAGACTTATCCTTATATTACAAACTACTA
AAATTTATAAATTCTTCTTTTTCTCTTAAAAAAAATATAACCTCTGTAAAAAAGGCTATAACTTTAATTGGTGAAAAACA
AACTATAAGATTTATTTCATTTATATTAGTATACGATATAACAAGCAACAACAAAGAATATGTAAAGACAACCTTAGTAA
GAGCAAAATTTCTAGATCTTTTATCTGAAAAAACAAATTATATAAATAAGTCAGATGAATTATTTTTTATGGGACTATTT
TATGGGATAGAAGACTTTTTAAATAAACCCTTAAAAGATATTTTACATGATCTTCCTATATCTGAAGATACCAAATCCGC
TCTTCTCGGTAAAAAAAATAAGCTAAATTATATACTTAATCTTGTATTAAACTATGAAAAAGGTGAATGGAAAAAAGTTA
ATGATATATGTAAACATCTGAATATATATCCTAATGAATTAACTACTATTTATATAAATGCTCTAAATTGGACAAATAAA
TTTAATCTTTAA

Upstream 100 bases:

>100_bases
AAATTAAAATTATTATCCAGCATTTATGTGATTTAGTAGACTTATGTTTATTATATATATTAGAATATACTTAAAATAAA
CTTTTATTGGGGGAATTTTT

Downstream 100 bases:

>100_bases
ATTCTTTATAATAATTTAATTTTATAAATAAAAAGTATAAGATATAATCTTTATAATAAAATTTTATCTTATACTTTTTT
ATATTCACCTATTATATTTC

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTNGKKAFINFTENLILDDIASL
LPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFVLMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNK
IKFLAEKIETREEFTEAASMGYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
KFINSSFSLKKNITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDLLSEKTNYINKSDELFFMGLF
YGIEDFLNKPLKDILHDLPISEDTKSALLGKKNKLNYILNLVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNK
FNL

Sequences:

>Translated_403_residues
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTNGKKAFINFTENLILDDIASL
LPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFVLMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNK
IKFLAEKIETREEFTEAASMGYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
KFINSSFSLKKNITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDLLSEKTNYINKSDELFFMGLF
YGIEDFLNKPLKDILHDLPISEDTKSALLGKKNKLNYILNLVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNK
FNL
>Mature_403_residues
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTNGKKAFINFTENLILDDIASL
LPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFVLMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNK
IKFLAEKIETREEFTEAASMGYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
KFINSSFSLKKNITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDLLSEKTNYINKSDELFFMGLF
YGIEDFLNKPLKDILHDLPISEDTKSALLGKKNKLNYILNLVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNK
FNL

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46813; Mature: 46813

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTN
CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
GKKAFINFTENLILDDIASLLPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFV
CCCEEHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHEEEEHHHHHHCCCEEEEHHHH
LMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNKIKFLAEKIETREEFTEAASM
HHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KFINSSFSLKKNITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDL
HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH
LSEKTNYINKSDELFFMGLFYGIEDFLNKPLKDILHDLPISEDTKSALLGKKNKLNYILN
HHHHHHCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHH
LVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNKFNL
HHEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKVIINSFLLIGIKNLTN
CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
GKKAFINFTENLILDDIASLLPKEYVTIEILENVTPSKAIICSCKNLKQEGYTIALDDFV
CCCEEHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCHHEEEEHHHHHHCCCEEEEHHHH
LMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNKIKFLAEKIETREEFTEAASM
HHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GYSLFQGYFFSKPTIFNERDIPIHSITKYKILKEINKEDIDFNYLEELIKTDLSLYYKLL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KFINSSFSLKKNITSVKKAITLIGEKQTIRFISFILVYDITSNNKEYVKTTLVRAKFLDL
HHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH
LSEKTNYINKSDELFFMGLFYGIEDFLNKPLKDILHDLPISEDTKSALLGKKNKLNYILN
HHHHHHCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHH
LVLNYEKGEWKKVNDICKHLNIYPNELTTIYINALNWTNKFNL
HHEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]