| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226947676
Identifier: 226947676
GI number: 226947676
Start: 570201
End: 570851
Strand: Direct
Name: 226947676
Synonym: CLM_0522
Alternate gene names: NA
Gene position: 570201-570851 (Clockwise)
Preceding gene: 226947674
Following gene: 226947677
Centisome position: 13.72
GC content: 31.03
Gene sequence:
>651_bases TTGGGATATATTAAGGGAGATAAATTTTCCCTAATGATAGATGGAGGTAATTCAGCTAAACATGTGGCAATTTATATGCA GGAACTAGAGAAGAGACAATTGCCACATCCAAAGTTTGTTGCTATTACACATTGGCATTGGGATCACACCCTTGGTATTT CATCAACAAATGCTGTTATTATTGCAAATTCATTAACCAATAAGCAACTATGTAAGATGAGAAGATGGAAATGGGATGAA GAATCTATGGACAAGCGAGTAGCCGCTGGTGAGGAAATTGAATTTTGTAATAGTATGATTAAGAAAGAATATCCCAAAAA AGATAAAATTAAAGTTATTAGTGCAGATATGATATTTAATAATTATTTTATGCTTGATTTAGGTGGAATTACCTGCGAGA TGATAAAAATAGGTGGATGTCATAGTGATGATTCAACAATTTTTTATGTACCAGAAGAAAAGATACTATTTATCGGAGAT GCTGCATGTGAAGATTTGTATCATGGAGAAAGTTATGATAAAGGCAAGATAAAAAAGGTTATTAGCATTTTATCAAAAAT TGAATTTAATATTGTTATAGAAGGTCATAATGAACATACAGACAAAGCTGAGTTATTAGAGTATTTAGAAGGAAAGCTTA CAGAAATTTAA
Upstream 100 bases:
>100_bases TAATAGAGATTATAGATTATAACGAGGTGAATACATGTTTAAAAAATTAACTGAAAGAGTGTATTATTTGGAACATAATT AAGATACAGATAGACCTGTT
Downstream 100 bases:
>100_bases AATAGAGTAGAATGAAAGGATTGATATATAGGACATACTTCAAAGATTTATTCGGTTTATGAAGAAACAATATTTAATGA AACTCCATTTTCTTACATCG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain-Containing Protein; Beta-Lactamase Domain Protein
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MGYIKGDKFSLMIDGGNSAKHVAIYMQELEKRQLPHPKFVAITHWHWDHTLGISSTNAVIIANSLTNKQLCKMRRWKWDE ESMDKRVAAGEEIEFCNSMIKKEYPKKDKIKVISADMIFNNYFMLDLGGITCEMIKIGGCHSDDSTIFYVPEEKILFIGD AACEDLYHGESYDKGKIKKVISILSKIEFNIVIEGHNEHTDKAELLEYLEGKLTEI
Sequences:
>Translated_216_residues MGYIKGDKFSLMIDGGNSAKHVAIYMQELEKRQLPHPKFVAITHWHWDHTLGISSTNAVIIANSLTNKQLCKMRRWKWDE ESMDKRVAAGEEIEFCNSMIKKEYPKKDKIKVISADMIFNNYFMLDLGGITCEMIKIGGCHSDDSTIFYVPEEKILFIGD AACEDLYHGESYDKGKIKKVISILSKIEFNIVIEGHNEHTDKAELLEYLEGKLTEI >Mature_215_residues GYIKGDKFSLMIDGGNSAKHVAIYMQELEKRQLPHPKFVAITHWHWDHTLGISSTNAVIIANSLTNKQLCKMRRWKWDEE SMDKRVAAGEEIEFCNSMIKKEYPKKDKIKVISADMIFNNYFMLDLGGITCEMIKIGGCHSDDSTIFYVPEEKILFIGDA ACEDLYHGESYDKGKIKKVISILSKIEFNIVIEGHNEHTDKAELLEYLEGKLTEI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24769; Mature: 24638
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYIKGDKFSLMIDGGNSAKHVAIYMQELEKRQLPHPKFVAITHWHWDHTLGISSTNAVI CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCEEECCCCCCEEE IANSLTNKQLCKMRRWKWDEESMDKRVAAGEEIEFCNSMIKKEYPKKDKIKVISADMIFN EEECCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEC NYFMLDLGGITCEMIKIGGCHSDDSTIFYVPEEKILFIGDAACEDLYHGESYDKGKIKKV CEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCEEEEECHHHHHHHCCCCCCHHHHHHH ISILSKIEFNIVIEGHNEHTDKAELLEYLEGKLTEI HHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GYIKGDKFSLMIDGGNSAKHVAIYMQELEKRQLPHPKFVAITHWHWDHTLGISSTNAVI CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCEEECCCCCCEEE IANSLTNKQLCKMRRWKWDEESMDKRVAAGEEIEFCNSMIKKEYPKKDKIKVISADMIFN EEECCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEC NYFMLDLGGITCEMIKIGGCHSDDSTIFYVPEEKILFIGDAACEDLYHGESYDKGKIKKV CEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCEEEEECHHHHHHHCCCCCCHHHHHHH ISILSKIEFNIVIEGHNEHTDKAELLEYLEGKLTEI HHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA