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The map label for this gene is 226947647

Identifier: 226947647

GI number: 226947647

Start: 525668

End: 526783

Strand: Direct

Name: 226947647

Synonym: CLM_0484

Alternate gene names: NA

Gene position: 525668-526783 (Clockwise)

Preceding gene: 226947646

Following gene: 226947648

Centisome position: 12.65

GC content: 26.43

Gene sequence:

>1116_bases
ATGTATAGAAAAAAACTAAACTTAAAAACTGTATGTGCTTTTATTCTTATATTATTTATTAATATATTACTTATTTCCTG
CAAGAGTGGAAATAGCAATAAGGGTATCATAGTGGAAAAATGGGATAATTTTTATGAAGGGAATAACATACATTTTTATT
ATAGTGATGGCAAAAGTCCAAACTCTCAACAATTAAAATCCAAGTATTCTTTAGATAAGCTTACATCAAAAGGAAAAGAT
GATTTAGATAAGGCTTTAGAGATAACTAGTTGGTTAAATAATAAATTGAAGTTTTCTAAGAACAGTATAAAGACAGAAGA
GGACACTTTAACTATATTAGAAAAATATAAAGAGGGAGAGACTGTTTCAGATAAAGAATTTAATGAGATTTTTACAGAGG
CTATTTCTTCTGTTGGAATATATTCAAGAATAGGAGAATTTAGAGTTAAGGACGCTCAGCATAGCAAGAAGAATGATTTT
TTCATGGTTTCAGAAATTTGGAGCAATAAATATAAAAAATGGATAATGATAGATGTGGTTAATTCCTGTTATATGTCCAA
AGCTGGAGTGCCATTAAGTGCTATAGAAATTTTAAATAATGGAATAAGTGGACTAGAAATAAATGGAGTTAAAGATAAAA
ATAAATATATTAAAAAAATGGAGAGATATTTTTATAGCTACACTATAGGTATCGACAATAATATTCATGATGGAGTCAAA
AGTAATTCATATATTACTTATATACAAAGTGGACAATTACCAGAATTGAAAACTATTAAAGGATATATTAAACCAACTAT
TTTTGTAAATAATGACTATTTATTTACTATTTCACCTAAAATTGAGTATAAAGACTTACAAAATGATAAAAAACCTACTC
TAATAATATCTAAAAAGAACATTGAAGGAAAAGAAGAAGAAACTCCAAGTTTTTATGTAGTTTCTTTTAAAGATAGTGTT
ATGGTTACGGAGTTCTATATAAGTGTTAATGGAGCAGATTTTGGCAAAGTAAATACTATTTTTGAATTGAAATTAAAAGA
AGGGCAAAACTCTATAAAGTTATCAGAAAATGGTAAGGATGCCGTAAGGGAAGTAATAGTGAATTATAAAAAGTAA

Upstream 100 bases:

>100_bases
TTGTGAATATTATATAAATAATAAAAATTTTAAATTAATACTAGATACTTAATATACGATAAACATATTAATATATAAAT
TGAGAAAAAGGGGAATTTAA

Downstream 100 bases:

>100_bases
TAAAGATTATTATTTTCTTATATGTTCATTAATATATTTGTATAAGTCATAAAAAATAGTATAATATAGAAGGTATTAAA
TAAAAAAGAGAGTGAGGAGT

Product: putative lipoprotein

Products: NA

Alternate protein names: Transglutaminase Domain Protein

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD
DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF
FMVSEIWSNKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDYLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVVSFKDSV
MVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKDAVREVIVNYKK

Sequences:

>Translated_371_residues
MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD
DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF
FMVSEIWSNKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDYLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVVSFKDSV
MVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKDAVREVIVNYKK
>Mature_371_residues
MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKD
DLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDF
FMVSEIWSNKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDYLFTISPKIEYKDLQNDKKPTLIISKKNIEGKEEETPSFYVVSFKDSV
MVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKDAVREVIVNYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42650; Mature: 42650

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSP
CCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC
NSQQLKSKYSLDKLTSKGKDDLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCC
TVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDFFMVSEIWSNKYKKWIMIDVV
CCCCHHHHHHHHHHHHHCHHHHHHCCCEECCCCCCCCCCEEEEEHHHCCCCCEEEEEEEH
NSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
HHHHHHCCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCC
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDYLFTISPKIEYKDLQNDKKPTLIISKKN
CCCEEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECCCEEEHHCCCCCCCEEEEEECC
IEGKEEETPSFYVVSFKDSVMVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKD
CCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCHH
AVREVIVNYKK
HHHHHHHCCCC
>Mature Secondary Structure
MYRKKLNLKTVCAFILILFINILLISCKSGNSNKGIIVEKWDNFYEGNNIHFYYSDGKSP
CCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC
NSQQLKSKYSLDKLTSKGKDDLDKALEITSWLNNKLKFSKNSIKTEEDTLTILEKYKEGE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCC
TVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDFFMVSEIWSNKYKKWIMIDVV
CCCCHHHHHHHHHHHHHCHHHHHHCCCEECCCCCCCCCCEEEEEHHHCCCCCEEEEEEEH
NSCYMSKAGVPLSAIEILNNGISGLEINGVKDKNKYIKKMERYFYSYTIGIDNNIHDGVK
HHHHHHCCCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCC
SNSYITYIQSGQLPELKTIKGYIKPTIFVNNDYLFTISPKIEYKDLQNDKKPTLIISKKN
CCCEEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECCCEEEHHCCCCCCCEEEEEECC
IEGKEEETPSFYVVSFKDSVMVTEFYISVNGADFGKVNTIFELKLKEGQNSIKLSENGKD
CCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCHH
AVREVIVNYKK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA