Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
---|---|
Accession | NC_012563 |
Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is yebN [C]
Identifier: 226947627
GI number: 226947627
Start: 502774
End: 503325
Strand: Direct
Name: yebN [C]
Synonym: CLM_0464
Alternate gene names: 226947627
Gene position: 502774-503325 (Clockwise)
Preceding gene: 226947626
Following gene: 226947628
Centisome position: 12.1
GC content: 24.64
Gene sequence:
>552_bases ATGGAAGTACAAGAACTCTTTTTACTGGCTTTAGCAATTTCTTTAGATGCTTTTGGAGTAATACTGTGCATTGGCATAAA TAAAGGTATTACTTTAAAATCAAGCATGATTTTTGTTTTTTCTTTTGGATTTTTTCAGTTTTTTCTTTCTTTTTTGGGCG GATACATAGGTACTATTTTTAATAAATATATAGTTCCAATACCAACTATTGTAGGTGGCTTAATAATAATAATAATAGGA ATGCTGATGATAACAGAGGGTTTTAAAGAAAAAGAAAAAAGTATATTTTTGAATAAAATTATGTATCTTATATTGGGAGT TTCTGTAAGCATAGATGCTTTAGTTATAGGTTTTACAACTTTAAGTTATATTAACAATTTGTTTTATTTATTTATGAGCT CTTTGTTTATGGGATTGATCGCTACAATAATTTGCAGTTTAGGGATTATTTTATCTAAATATATTAAGAAAATATCTATA ATCTCAAGTTATGCAGATTATATAGGAGGAATAATATTAATATTATTTGGTTTGAAAATGTTATTTTTTTAA
Upstream 100 bases:
>100_bases ATTAAATAAAATAAATAACTTTGCTCGTTATAAAAGTAGTATTTTATATATATAAATAGTTAAGAAAGCATTTATTATTT AATATTAATAGGGGGATATG
Downstream 100 bases:
>100_bases AATTATTAATAGGTATTGAGTTATGTTTACTAATTATTGTATTATTATCATAAGGTGATAATTATGATAGAAGAGGAATT ATTGAAGAAAAACAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIFNKYIVPIPTIVGGLIIIIIG MLMITEGFKEKEKSIFLNKIMYLILGVSVSIDALVIGFTTLSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISI ISSYADYIGGIILILFGLKMLFF
Sequences:
>Translated_183_residues MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIFNKYIVPIPTIVGGLIIIIIG MLMITEGFKEKEKSIFLNKIMYLILGVSVSIDALVIGFTTLSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISI ISSYADYIGGIILILFGLKMLFF >Mature_183_residues MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIFNKYIVPIPTIVGGLIIIIIG MLMITEGFKEKEKSIFLNKIMYLILGVSVSIDALVIGFTTLSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISI ISSYADYIGGIILILFGLKMLFF
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0059 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003810 - InterPro: IPR022929 [H]
Pfam domain/function: PF02659 DUF204 [H]
EC number: NA
Molecular weight: Translated: 20308; Mature: 20308
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIF CCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKYIVPIPTIVGGLIIIIIGMLMITEGFKEKEKSIFLNKIMYLILGVSVSIDALVIGFTT HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISIISSYADYIGGIILILFGLKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFF HHC >Mature Secondary Structure MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFFQFFLSFLGGYIGTIF CCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKYIVPIPTIVGGLIIIIIGMLMITEGFKEKEKSIFLNKIMYLILGVSVSIDALVIGFTT HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISIISSYADYIGGIILILFGLKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFF HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA