Click here to switch to the map view.

The map label for this gene is 226947621

Identifier: 226947621

GI number: 226947621

Start: 497384

End: 497854

Strand: Direct

Name: 226947621

Synonym: CLM_0458

Alternate gene names: NA

Gene position: 497384-497854 (Clockwise)

Preceding gene: 226947620

Following gene: 226947622

Centisome position: 11.97

GC content: 30.15

Gene sequence:

>471_bases
ATGATTTTTGTAGAAATTCCAGGTAGAGATAACCTTAATATTAAAAATATTGTTTTTGATTATAATGGAACAGTAGCAGA
GGATGGAATTATGGCCTATCAAACAAAAGAAAACCTAAAAAAAATAAGTGAAAAATTAAAGGTATACATAATAACTGCAG
ATACCTATGGAAATGTAAAAAAACAATGTGAAGGCTTGCCAGTAAGTATAGAAACTTTTCCTAAAGGTAATGCTACTTTT
TATAAAAAATCCTTTGTAGAAAAATTAGGACTAGGAGAAACTATGGTAATAGGTAATGGTATGAATGATATAGAAATGTT
TAAAGTAGCCACTCTTTCTATAGCTGTAATAGGTGAGGAAGGCTGTGCAGGAAAACTAATAGTTCAATCAGATATAGTTG
TCAGCAGCATAGAAAAAGTGTTTTCTATGATTGAAAACACCAATAGAATAGTAGCTACTCTTAGGGACTAA

Upstream 100 bases:

>100_bases
TTAAATAGTTTTCTTATAGAACTTAGCTTAAAGTTATATAATTATAAATTACAGTATCTTGTGTCATAGTACATTAGATG
TGAAAGAAAGTAGGTATAGA

Downstream 100 bases:

>100_bases
TAGTAAAATTAAAAATAATTTTGATAAAATATAATAATATAACTCAATAAAAGCTATGAAATTAATAGGAGAAAACCTAA
ATTTCATAGCTTTTATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Soluble P-Type ATPase; HAD FAmily Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Hydrolase; HAD FAmily Hydrolase Domain Protein; HAD FAmily Hydrolase Fragment; HAD Family Hydrolase A; HAD Family Hydrolase Fragment

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIFVEIPGRDNLNIKNIVFDYNGTVAEDGIMAYQTKENLKKISEKLKVYIITADTYGNVKKQCEGLPVSIETFPKGNATF
YKKSFVEKLGLGETMVIGNGMNDIEMFKVATLSIAVIGEEGCAGKLIVQSDIVVSSIEKVFSMIENTNRIVATLRD

Sequences:

>Translated_156_residues
MIFVEIPGRDNLNIKNIVFDYNGTVAEDGIMAYQTKENLKKISEKLKVYIITADTYGNVKKQCEGLPVSIETFPKGNATF
YKKSFVEKLGLGETMVIGNGMNDIEMFKVATLSIAVIGEEGCAGKLIVQSDIVVSSIEKVFSMIENTNRIVATLRD
>Mature_156_residues
MIFVEIPGRDNLNIKNIVFDYNGTVAEDGIMAYQTKENLKKISEKLKVYIITADTYGNVKKQCEGLPVSIETFPKGNATF
YKKSFVEKLGLGETMVIGNGMNDIEMFKVATLSIAVIGEEGCAGKLIVQSDIVVSSIEKVFSMIENTNRIVATLRD

Specific function: Unknown

COG id: COG4087

COG function: function code R; Soluble P-type ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17224; Mature: 17224

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVEIPGRDNLNIKNIVFDYNGTVAEDGIMAYQTKENLKKISEKLKVYIITADTYGNVK
CEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEECHHHHHHHHHCEEEEEEEECCCCCHH
KQCEGLPVSIETFPKGNATFYKKSFVEKLGLGETMVIGNGMNDIEMFKVATLSIAVIGEE
HHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHEEEEEEEEEEEECC
GCAGKLIVQSDIVVSSIEKVFSMIENTNRIVATLRD
CCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MIFVEIPGRDNLNIKNIVFDYNGTVAEDGIMAYQTKENLKKISEKLKVYIITADTYGNVK
CEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEECHHHHHHHHHCEEEEEEEECCCCCHH
KQCEGLPVSIETFPKGNATFYKKSFVEKLGLGETMVIGNGMNDIEMFKVATLSIAVIGEE
HHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHEEEEEEEEEEEECC
GCAGKLIVQSDIVVSSIEKVFSMIENTNRIVATLRD
CCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA