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The map label for this gene is 226947606

Identifier: 226947606

GI number: 226947606

Start: 470788

End: 471324

Strand: Reverse

Name: 226947606

Synonym: CLM_0443

Alternate gene names: NA

Gene position: 471324-470788 (Counterclockwise)

Preceding gene: 226947607

Following gene: 226947593

Centisome position: 11.34

GC content: 27.93

Gene sequence:

>537_bases
ATGAAAAATAAAAATTACAATACTAGAAAAATGATTTTTTTAAGTTTGATGGTAGGTATAGCATTAATTATATACATAAT
AGAGGCTCAAATACCTGTACTTTTTCCTGGTATTAAACTAGGTCTTGCTAATGTTATTTCACTAGTTACCTTAATTATGT
TAGGTGGATATGAAGCCCTATTGGTTATGTTTCTAAGAACCCTTTTAGGCTCTATGTTTGCAGGGAATATGTCTTCTTTT
ATGTTTAGCTTGGCTGGTGGTTTTTTAAGTAACATTATTATGATTATACTTTATTATAAATTTAAAGAAAACTTAAGTTT
AAGTTCCATAAGTATTTGCGGTGCTATCTTTCACAATATAGGTCAACTCTTTATAGCTGCCTTTGTGGTAAAAGATTTTA
GAATATATGTGTATTTACCGGTACTTATGATTTCCGGTATAATAACAGGTTATTTTATAGGTCTATGCACTAAATATCTT
AATAAAAATTTGGGCAATGTAAAACTATTTAATGAACTGAAGAACAATGAAAAATGA

Upstream 100 bases:

>100_bases
GTGAAACGGCTGCTTGTCTTCCTCATAAACTCATAATTACTATTGAAAAAAATGATAAAGAAGTAGACGAAGTTTCTTAT
TAAATTTAGGAGTAATCTAT

Downstream 100 bases:

>100_bases
TCAATTGTCAATGCTCAATGATCGGTGCTCAATTGTTAATTAATAATTTTTAATTGAGCATTGGACATTACTAATTGATT
ATTGACCATTAAATAAAAGA

Product: hypothetical protein

Products: diphosphate; all-trans-heptaprenyl diphosphate

Alternate protein names: Heptaprenyl Diphosphate Synthase Component I Family Protein; Trans-Hexaprenyltranstransferase; Integral Membrane Protein; Heptaprenyl Diphosphate Synthase Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEALLVMFLRTLLGSMFAGNMSSF
MFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNIGQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYL
NKNLGNVKLFNELKNNEK

Sequences:

>Translated_178_residues
MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEALLVMFLRTLLGSMFAGNMSSF
MFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNIGQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYL
NKNLGNVKLFNELKNNEK
>Mature_178_residues
MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEALLVMFLRTLLGSMFAGNMSSF
MFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNIGQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYL
NKNLGNVKLFNELKNNEK

Specific function: Unknown

COG id: COG4769

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.30

Molecular weight: Translated: 19924; Mature: 19924

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCHHHH
LVMFLRTLLGSMFAGNMSSFMFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYLNKNLGNVKLFNELKNNEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANVISLVTLIMLGGYEAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCHHHH
LVMFLRTLLGSMFAGNMSSFMFSLAGGFLSNIIMIILYYKFKENLSLSSISICGAIFHNI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYLNKNLGNVKLFNELKNNEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: all-trans-hexaprenyl diphosphate; isopentenyl diphosphate

Specific reaction: all-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA