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The map label for this gene is 226947540

Identifier: 226947540

GI number: 226947540

Start: 396535

End: 397152

Strand: Direct

Name: 226947540

Synonym: CLM_0376

Alternate gene names: NA

Gene position: 396535-397152 (Clockwise)

Preceding gene: 226947539

Following gene: 226947542

Centisome position: 9.54

GC content: 31.39

Gene sequence:

>618_bases
TTGACAGCAGTGCAGCAATCTTTATCAAGTTTTGGAATGTTAATGATTCAAGGATTAATTAATACATTTGGAACTACTGT
TATGGCTGCCTTTGCAGCTTGTTCAAAGATTGATGAGTTTGCTAATCGTCCTTTACAGGATTTAAGTAATGCATTTTCAA
CTTATGTGGCACAAAATAAGGGAGCAGGAAATATAGAAAGAATTCGCCAAGGGTTTTATGTCATTTTAAAAGTTATTGCT
TTAATTTCTTTTGTAATATCAATAGTTGTCTTTATTTTTGCTCCTAATTTAATTTCAATTTTTGTAAAAAAGGAATCCAT
AGATATTATTCAGGTTGGGGTAGGTTATCTTCGGATTGTATGTATTTTTTACATATTACTTGGTTGTATCGTTATGTTTT
ATGGATTTTTCCGTGGTATGGGAGAAGTTAATATATCAATTATTTTAACTGTTGTATCTCAAGGAATAAGAGTAGCCTTG
GCCTATGGACTAGCCAGAACATCTATGGGATTTACAGGAATATGCTGGTCCATTGTAATTGGATGGTTCTTATCCAATGC
TTTAGGTGGATTTATGTATAAAAAAGTAATGGCAAATTCAATACAATTATATAGATAG

Upstream 100 bases:

>100_bases
TTTTAAGATTTATAGTACAAGGGATATTAATGAAGGTGTAGTAAGAATAGATAATATATTTAGTAGAAAACTTTTTAAAA
CTATTTTAAGCTACTCTGTT

Downstream 100 bases:

>100_bases
GAGTGTTATGTGAGCACTCCTACTTTTAGTGCACTCAGTACTGGCAATAACTTAGCTTATTGGTGAAAGTTTGAGATTAG
TTTAATAGTGAGAATTAGGA

Product: mate efflux family protein

Products: NA

Alternate protein names: Mate Efflux Family Protein; Na+-Driven Multidrug Efflux Pump; MatE Efflux Family Protein; Cation Efflux Pump; MATE Efflux Family Protein DinF; Drug/Sodium Antiporter; Multidrug Resistance Protein MATE Family; Multidrug Resistance Protein; Na+ Driven Multidrug Efflux Pump; MATE Family Efflux Protein; DinF Damage-Inducible Protein

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTAVQQSLSSFGMLMIQGLINTFGTTVMAAFAACSKIDEFANRPLQDLSNAFSTYVAQNKGAGNIERIRQGFYVILKVIA
LISFVISIVVFIFAPNLISIFVKKESIDIIQVGVGYLRIVCIFYILLGCIVMFYGFFRGMGEVNISIILTVVSQGIRVAL
AYGLARTSMGFTGICWSIVIGWFLSNALGGFMYKKVMANSIQLYR

Sequences:

>Translated_205_residues
MTAVQQSLSSFGMLMIQGLINTFGTTVMAAFAACSKIDEFANRPLQDLSNAFSTYVAQNKGAGNIERIRQGFYVILKVIA
LISFVISIVVFIFAPNLISIFVKKESIDIIQVGVGYLRIVCIFYILLGCIVMFYGFFRGMGEVNISIILTVVSQGIRVAL
AYGLARTSMGFTGICWSIVIGWFLSNALGGFMYKKVMANSIQLYR
>Mature_204_residues
TAVQQSLSSFGMLMIQGLINTFGTTVMAAFAACSKIDEFANRPLQDLSNAFSTYVAQNKGAGNIERIRQGFYVILKVIAL
ISFVISIVVFIFAPNLISIFVKKESIDIIQVGVGYLRIVCIFYILLGCIVMFYGFFRGMGEVNISIILTVVSQGIRVALA
YGLARTSMGFTGICWSIVIGWFLSNALGGFMYKKVMANSIQLYR

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22573; Mature: 22442

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVQQSLSSFGMLMIQGLINTFGTTVMAAFAACSKIDEFANRPLQDLSNAFSTYVAQNK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GAGNIERIRQGFYVILKVIALISFVISIVVFIFAPNLISIFVKKESIDIIQVGVGYLRIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
CIFYILLGCIVMFYGFFRGMGEVNISIILTVVSQGIRVALAYGLARTSMGFTGICWSIVI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GWFLSNALGGFMYKKVMANSIQLYR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAVQQSLSSFGMLMIQGLINTFGTTVMAAFAACSKIDEFANRPLQDLSNAFSTYVAQNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GAGNIERIRQGFYVILKVIALISFVISIVVFIFAPNLISIFVKKESIDIIQVGVGYLRIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
CIFYILLGCIVMFYGFFRGMGEVNISIILTVVSQGIRVALAYGLARTSMGFTGICWSIVI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GWFLSNALGGFMYKKVMANSIQLYR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA