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The map label for this gene is yvrC [H]

Identifier: 226947525

GI number: 226947525

Start: 349064

End: 350095

Strand: Direct

Name: yvrC [H]

Synonym: CLM_0359

Alternate gene names: 226947525

Gene position: 349064-350095 (Clockwise)

Preceding gene: 226947524

Following gene: 226947526

Centisome position: 8.4

GC content: 30.72

Gene sequence:

>1032_bases
ATGTTAAAAAAGTGTGTAACATTATTTATAGGATTTATTTTTATTTTAGGGCTAGTAGGTTGCTCTCAATCTACACAAGG
ACAGAATGGAAAAGGGAAAACTATAGGTGAACAAGAACAAAAACAAAATAAATCTAAAAGTAAATATCCTGTAAATATTA
AGGTTTATACTGATGAGGGAAAAGAGATAGTACAAACCATAGAAAAAGAGCCTAAGAGAGTGGTGATAATGGGACAATCT
ATGGCTGAATTAATGATTAAATTTGGATTACAAGATAAAGTTGTTGGGGTAGGATATCTTGATAAATCTTTTTCAAAATA
TGATGATGAAATATCTAAAATGCCCATTATTGCAAAATCATGGCCTTCTAAAGAAGCAATAATTGCTTTGAAGCCTGATA
TTATTTATTCTATGTCTTCAGCCTTTAAAGAAGATAGAGTAGGTGACATTTCCTTTTGGAATGATAGAGGTATTCCGGTT
CTTCCAGCGGTAAATTTTACAATAGGGCGAAGCATTGATGAATATTTTAAGGACATTAAGAATTTTGGATTAGCTTTTAA
CATTGAAAATGAGACAAATAAGTATTTAAAAGAACAAAAGGATAGAATGGATAAAGTTAAAGAAGTAGCTAAAAAAGCAA
AAACTACCCCAAATGTATTACTTATGGCAAGTGCTGGACGTGAAAATTATGATTATTATCCGCCATCAGGGTGCATAATT
GATGAAGTAATTGAAGGTGCAGGTGGAAAATATATAGAATTATCAAAGGATTCATATACGGAAATGTCAATTGAGTCAAT
TATTGCTGCAAATCCAGAAAAAATAATTATAACTGAGTTTCAAGGTCCTGATAGAGAAAAGATAAAAAATAAAATACTTT
CTAATAAAAGACTTCAAAATGTTATTGCAATAAAGACAGGTAATGTGATGGTTGTAGACTACACCAATGCAATACGTGGA
AGCCTTGAACTTTCAGATTTGTATGAAGATGTTGCAAAATTTATTCATCCTGAACTATTTGGAGGAAATTAG

Upstream 100 bases:

>100_bases
AGTGACTACATCAATATAGATAATATGAATTTTTTTGTATTATAGTTCTTAAGAAGAAATAAAATTTTTGTAGTTACTAG
AATACATAAGGAGGTAAAAA

Downstream 100 bases:

>100_bases
TTATGTTACAAACAGGAAAAGTAGGAGTAGCAGAATCCAATACAGGGAATTATGGATGTACTTTAAAAAAACATTCTCTG
TTTACTACAATAATTATTGG

Product: iron chelate uptake ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLKKCVTLFIGFIFILGLVGCSQSTQGQNGKGKTIGEQEQKQNKSKSKYPVNIKVYTDEGKEIVQTIEKEPKRVVIMGQS
MAELMIKFGLQDKVVGVGYLDKSFSKYDDEISKMPIIAKSWPSKEAIIALKPDIIYSMSSAFKEDRVGDISFWNDRGIPV
LPAVNFTIGRSIDEYFKDIKNFGLAFNIENETNKYLKEQKDRMDKVKEVAKKAKTTPNVLLMASAGRENYDYYPPSGCII
DEVIEGAGGKYIELSKDSYTEMSIESIIAANPEKIIITEFQGPDREKIKNKILSNKRLQNVIAIKTGNVMVVDYTNAIRG
SLELSDLYEDVAKFIHPELFGGN

Sequences:

>Translated_343_residues
MLKKCVTLFIGFIFILGLVGCSQSTQGQNGKGKTIGEQEQKQNKSKSKYPVNIKVYTDEGKEIVQTIEKEPKRVVIMGQS
MAELMIKFGLQDKVVGVGYLDKSFSKYDDEISKMPIIAKSWPSKEAIIALKPDIIYSMSSAFKEDRVGDISFWNDRGIPV
LPAVNFTIGRSIDEYFKDIKNFGLAFNIENETNKYLKEQKDRMDKVKEVAKKAKTTPNVLLMASAGRENYDYYPPSGCII
DEVIEGAGGKYIELSKDSYTEMSIESIIAANPEKIIITEFQGPDREKIKNKILSNKRLQNVIAIKTGNVMVVDYTNAIRG
SLELSDLYEDVAKFIHPELFGGN
>Mature_343_residues
MLKKCVTLFIGFIFILGLVGCSQSTQGQNGKGKTIGEQEQKQNKSKSKYPVNIKVYTDEGKEIVQTIEKEPKRVVIMGQS
MAELMIKFGLQDKVVGVGYLDKSFSKYDDEISKMPIIAKSWPSKEAIIALKPDIIYSMSSAFKEDRVGDISFWNDRGIPV
LPAVNFTIGRSIDEYFKDIKNFGLAFNIENETNKYLKEQKDRMDKVKEVAKKAKTTPNVLLMASAGRENYDYYPPSGCII
DEVIEGAGGKYIELSKDSYTEMSIESIIAANPEKIIITEFQGPDREKIKNKILSNKRLQNVIAIKTGNVMVVDYTNAIRG
SLELSDLYEDVAKFIHPELFGGN

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 38509; Mature: 38509

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKCVTLFIGFIFILGLVGCSQSTQGQNGKGKTIGEQEQKQNKSKSKYPVNIKVYTDEG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCC
KEIVQTIEKEPKRVVIMGQSMAELMIKFGLQDKVVGVGYLDKSFSKYDDEISKMPIIAKS
HHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCEEECC
WPSKEAIIALKPDIIYSMSSAFKEDRVGDISFWNDRGIPVLPAVNFTIGRSIDEYFKDIK
CCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCCHHHCCCHHHHHHHHH
NFGLAFNIENETNKYLKEQKDRMDKVKEVAKKAKTTPNVLLMASAGRENYDYYPPSGCII
HCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHH
DEVIEGAGGKYIELSKDSYTEMSIESIIAANPEKIIITEFQGPDREKIKNKILSNKRLQN
HHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHCE
VIAIKTGNVMVVDYTNAIRGSLELSDLYEDVAKFIHPELFGGN
EEEEECCCEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKKCVTLFIGFIFILGLVGCSQSTQGQNGKGKTIGEQEQKQNKSKSKYPVNIKVYTDEG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCC
KEIVQTIEKEPKRVVIMGQSMAELMIKFGLQDKVVGVGYLDKSFSKYDDEISKMPIIAKS
HHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCEEECC
WPSKEAIIALKPDIIYSMSSAFKEDRVGDISFWNDRGIPVLPAVNFTIGRSIDEYFKDIK
CCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCCHHHCCCHHHHHHHHH
NFGLAFNIENETNKYLKEQKDRMDKVKEVAKKAKTTPNVLLMASAGRENYDYYPPSGCII
HCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHH
DEVIEGAGGKYIELSKDSYTEMSIESIIAANPEKIIITEFQGPDREKIKNKILSNKRLQN
HHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHCE
VIAIKTGNVMVVDYTNAIRGSLELSDLYEDVAKFIHPELFGGN
EEEEECCCEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]