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The map label for this gene is ywjB [H]

Identifier: 226947475

GI number: 226947475

Start: 296391

End: 296915

Strand: Direct

Name: ywjB [H]

Synonym: CLM_0307

Alternate gene names: 226947475

Gene position: 296391-296915 (Clockwise)

Preceding gene: 226947474

Following gene: 226947476

Centisome position: 7.13

GC content: 27.05

Gene sequence:

>525_bases
ATGAAAAGAAAAATAATATTAAATTTAGCAATGAGCATAGATGGATATATAGCATCAAAAGATGGTGGATTTGATTGGAT
AGTTGGAGATGGAGATGAAAAATTAGATACTGAAGATAAATGGGATTATGATAAGTTTTTAAATAATGTGGATACTGTAG
TTATGGGAAAAAATTGTTATGACCAAAGCTTCCATAATGATTTTGCTGATAAAAGAGTATATGTAGCAACCTCACAAAAG
TTACAAAACTATGGCAATATACATTTTATAAATGGTGATATATGCAAAGTAATAGAAGAAGAAAAAGAAAAAAAGGGTAA
AGATATCTTCTTATTTGGTGGCGGAGGTCTTGTAGATAATTTTATTAAATCAAATATTATTGATGAGTATATAATTGGGA
TAATTCCTACAATATTAGGCAAAGGTAGACCTTTATTTCTAGAGAATAATCCTAAAATAGATTTACATCTAGATCAGTAT
ATTATGGATAAGGGTGTTGTAATATTAAGATATTCAAAAAGATAA

Upstream 100 bases:

>100_bases
CTTTTTATTAAAATGGGAAAAGATAGTCCATTTAAAACAAGAGATTTAATGTTTCCAGTATTATCTCATGCATAATAATA
AATGAAAAGGAATGATTATT

Downstream 100 bases:

>100_bases
ATATATATTCATAAAGGAATGGCTAGTTTATTAAGCAAGAATATAAATGTAGGAGAAGATAAATGAATTTTGTAGCTATA
GATTTTGAAACTGCTAATGA

Product: RibD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTEDKWDYDKFLNNVDTVVMGKNCYDQSFHNDFADKRVYVATSQK
LQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLVDNFIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQY
IMDKGVVILRYSKR

Sequences:

>Translated_174_residues
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTEDKWDYDKFLNNVDTVVMGKNCYDQSFHNDFADKRVYVATSQK
LQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLVDNFIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQY
IMDKGVVILRYSKR
>Mature_174_residues
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTEDKWDYDKFLNNVDTVVMGKNCYDQSFHNDFADKRVYVATSQK
LQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLVDNFIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQY
IMDKGVVILRYSKR

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 19907; Mature: 19907

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTEDKWDYDKFLNNVDTVVMGKNCY
CCCEEEEEEEECCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEECCCCC
DQSFHNDFADKRVYVATSQKLQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLVDN
CHHHHCCCCCCEEEEEECHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHH
FIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQYIMDKGVVILRYSKR
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTEDKWDYDKFLNNVDTVVMGKNCY
CCCEEEEEEEECCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEECCCCC
DQSFHNDFADKRVYVATSQKLQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLVDN
CHHHHCCCCCCEEEEEECHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHH
FIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQYIMDKGVVILRYSKR
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]