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The map label for this gene is ygaK [H]

Identifier: 226947458

GI number: 226947458

Start: 276640

End: 277971

Strand: Direct

Name: ygaK [H]

Synonym: CLM_0287

Alternate gene names: 226947458

Gene position: 276640-277971 (Clockwise)

Preceding gene: 226947455

Following gene: 226947459

Centisome position: 6.66

GC content: 39.64

Gene sequence:

>1332_bases
ATGACGAAACTTACTGGCAGAATTGTTTTCCCGGATGATCCAAGTTATGATAATGCTCGAATGGATTATAATACGAGATT
CTCAAAGTATCCCTGCGCTATTGTTTTTTGCCAAGAGATTCAGGATGTAATTAATGCAGTTAAATGGGCAAGAAAGAACT
GTGTTCCAATACGTACTCGCTGCGGAGGGCACAGTTATGAAGCTTTTTCACTATTGAATAATGGAATTGTTATAGATGTA
AGCGAAATGAATAAAGTACTTCTTGAGAAAGAGGATATGGAAGTAACTATCGAGGCTGGAGCTACCTTGCTGCCGATTTA
CAAGATTTTATGGGATAAAGGTGTTACTATTCCGGGAGGAACGTGCCCAACAGTTGGCATTGCCGGGATTACGCTGGGAG
GCGGATTTGGCATGCTTACAAGAAAGATGGGTATGCTTTGTGATAGCTTGATGGCAGTTGAGATGGTCAACGCAAGAGGG
AAAGTAGTATACGCTGACCGATACGTTAATTCCGATCTTTTTTGGGCTTCCTGTGGAGGTGGGGGTGGAAATTTTGGGAT
AGTAACGTCATTTATTTTTAAGGTTCATCCTATTTCAAACGTTGCAGTTTATAATATTACGTGGGATTGGTCGGATGCTA
GAGAAATCATCAAGACATGGCAGGATTGGGCGCCATTTGTTGATGAACGATTGACATCAATTCTAGAGATATTCACCAAA
AAGGATGGGCGTATTTCTTCATCCGGCGAATTTTTGGGCCATGAAGACCAGCTGAGATGCTTACTAAAACCATTAACTTC
TGTGGGCAATCCTATTCAGATTGAAGTTCAAACAATACCGTATATTGAAGCAGTAATAAAGTTTGATGGTGGGCCAGGCC
CTCATAAGTTCAAAAATACTGGGGCTTTTGTGTACCATAGGTTACCTGATGAGGCTATCGACACCCTACTTTGTTATATG
GGGATTTCCCCAAACAAAGATAACTCCATTCAATTTCAGAGTTTGGGAGGAGCAGTCAGGGAGATTCCTCCAGATGAAAC
AGCCTATTTTCATCGTAAAGCAAGCTATATCATGCAATATATAACAAACTGGAAAGTTGATAATGAAAAAAATCCGAACA
TCGTTTGGGTAGAAAGGCTCAGACGAGCCATGTTAAAATATGTGAATGGAACCTACGTCAATTGGCCTGATATCTTTATT
AAAAACTGGCCATGTGCATATTATGGTACCAATTATCATGAGCTTATGCGAATTAAAAGTAAATACGATTCTGAAAATAT
ATTCCACTTTGAACAGAGTATTCGTCCAGCCAAAAAAAGAAATTATAGATAA

Upstream 100 bases:

>100_bases
TAATAATTTATACTGACTTTAAAATTGTTATCAAACTTAAAATTGAAGTCATATATTATATAATAATGAATAAAAAAAGT
TGTAAGGAGGTAGGGGTGAA

Downstream 100 bases:

>100_bases
TACACACAATAAAATAGGTTTAGTAGATAATGTAGAAAAATTTGCACTCACAGGCGAAGAAATATGCCCAACTTTCAATG
ATCAAAGTTTAACTTTGTAT

Product: FAD-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MTKLTGRIVFPDDPSYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTRCGGHSYEAFSLLNNGIVIDV
SEMNKVLLEKEDMEVTIEAGATLLPIYKILWDKGVTIPGGTCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARG
KVVYADRYVNSDLFWASCGGGGGNFGIVTSFIFKVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTK
KDGRISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNTGAFVYHRLPDEAIDTLLCYM
GISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQYITNWKVDNEKNPNIVWVERLRRAMLKYVNGTYVNWPDIFI
KNWPCAYYGTNYHELMRIKSKYDSENIFHFEQSIRPAKKRNYR

Sequences:

>Translated_443_residues
MTKLTGRIVFPDDPSYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTRCGGHSYEAFSLLNNGIVIDV
SEMNKVLLEKEDMEVTIEAGATLLPIYKILWDKGVTIPGGTCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARG
KVVYADRYVNSDLFWASCGGGGGNFGIVTSFIFKVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTK
KDGRISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNTGAFVYHRLPDEAIDTLLCYM
GISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQYITNWKVDNEKNPNIVWVERLRRAMLKYVNGTYVNWPDIFI
KNWPCAYYGTNYHELMRIKSKYDSENIFHFEQSIRPAKKRNYR
>Mature_442_residues
TKLTGRIVFPDDPSYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTRCGGHSYEAFSLLNNGIVIDVS
EMNKVLLEKEDMEVTIEAGATLLPIYKILWDKGVTIPGGTCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARGK
VVYADRYVNSDLFWASCGGGGGNFGIVTSFIFKVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTKK
DGRISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNTGAFVYHRLPDEAIDTLLCYMG
ISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQYITNWKVDNEKNPNIVWVERLRRAMLKYVNGTYVNWPDIFIK
NWPCAYYGTNYHELMRIKSKYDSENIFHFEQSIRPAKKRNYR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50357; Mature: 50226

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLTGRIVFPDDPSYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTR
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEC
CGGHSYEAFSLLNNGIVIDVSEMNKVLLEKEDMEVTIEAGATLLPIYKILWDKGVTIPGG
CCCCCHHHHHHHCCCEEEEHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
TCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARGKVVYADRYVNSDLFWASCGG
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCC
GGGNFGIVTSFIFKVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTK
CCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KDGRISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNT
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCC
GAFVYHRLPDEAIDTLLCYMGISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQY
CEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEHHHCCHHHCCCCCCHHHHHHHHHHHHHH
ITNWKVDNEKNPNIVWVERLRRAMLKYVNGTYVNWPDIFIKNWPCAYYGTNYHELMRIKS
HHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEECCCCCEEECCCCEECCCCHHHHHHHHH
KYDSENIFHFEQSIRPAKKRNYR
HCCCCCEEEEHHHCCCHHHCCCC
>Mature Secondary Structure 
TKLTGRIVFPDDPSYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTR
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEC
CGGHSYEAFSLLNNGIVIDVSEMNKVLLEKEDMEVTIEAGATLLPIYKILWDKGVTIPGG
CCCCCHHHHHHHCCCEEEEHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
TCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARGKVVYADRYVNSDLFWASCGG
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCC
GGGNFGIVTSFIFKVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTK
CCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KDGRISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNT
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCC
GAFVYHRLPDEAIDTLLCYMGISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQY
CEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEHHHCCHHHCCCCCCHHHHHHHHHHHHHH
ITNWKVDNEKNPNIVWVERLRRAMLKYVNGTYVNWPDIFIKNWPCAYYGTNYHELMRIKS
HHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEECCCCCEEECCCCEECCCCHHHHHHHHH
KYDSENIFHFEQSIRPAKKRNYR
HCCCCCEEEEHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]