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The map label for this gene is yheN [H]

Identifier: 226947444

GI number: 226947444

Start: 258351

End: 259076

Strand: Direct

Name: yheN [H]

Synonym: CLM_0273

Alternate gene names: 226947444

Gene position: 258351-259076 (Clockwise)

Preceding gene: 226947443

Following gene: 226947445

Centisome position: 6.22

GC content: 25.9

Gene sequence:

>726_bases
ATGAAAAAATTTTTGGGTAAGATTGGTATAAGTTTGATTTTATTATTGTGTTTATCAACTAGTTATGTATATGCTTTTAA
TGAAGAATCAAAAGCTGATAATAATTCAAAAGAAAATAAGACAATATATTTAACTTTTGATGATGGACCTAGTACAAACA
CTAACAAAGTATTAGATACATTAAATGAATATAATGTTAAAGCAACATTTTTTCTTATAGGAAATCAAATTAAAGACCAA
GAAGAGGTTGTAAAAAGAACACAAGATGAAGGTCATAGTATAGGGTTGCATACTTATACTCATGATTTTAAAAAAATATA
TTCTAATAACCGGACTTTTATAGATGAAATGTTAAAATGTCAGGAAGAAATTTATAGAGTAACTGGTACTAGGCCTAATA
TAATTAGATTTCCAGGTGGTAGTGTAAAAAGATTAAATAAAGGATTTAAAAAGGAGTTAGAGGAAAAACATTTTAAAGTA
TATGATTGGAATGTAGATTGTCAAGATGGCATGAAACCAAAGATATCACCTAATAGGATATTTAAAAAAGCTACTGAAAG
TAATGTTAAAGATGAACCAATAATATTACTTATGCATTGTGATTATATGCAAAAAAATACCTGTAAAGCCCTACCAGAAA
TAATAAAGTTTTATAAAGATAAAGGATATGAATTCAAGACTATTAATAATGAAACCCCAGAATGCTATTTCCCATTAAGA
AAATAA

Upstream 100 bases:

>100_bases
TAGAAGTGGATTTCTAGCTCCGTTTTTTATTTTTGAATAAAAATAAGTATTTTTCAAACAATATAATGTTAGATGTTATC
TTAATAAAAAGGAGGATAAA

Downstream 100 bases:

>100_bases
ATAATTATAAGTAAAAAAGAGGCCATTTTATATTTAATAATGGGCTCTTTTTATATTGGATTTTCTATACATATTAGTGT
AGTAATTTGAACAATAGAAA

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKKFLGKIGISLILLLCLSTSYVYAFNEESKADNNSKENKTIYLTFDDGPSTNTNKVLDTLNEYNVKATFFLIGNQIKDQ
EEVVKRTQDEGHSIGLHTYTHDFKKIYSNNRTFIDEMLKCQEEIYRVTGTRPNIIRFPGGSVKRLNKGFKKELEEKHFKV
YDWNVDCQDGMKPKISPNRIFKKATESNVKDEPIILLMHCDYMQKNTCKALPEIIKFYKDKGYEFKTINNETPECYFPLR
K

Sequences:

>Translated_241_residues
MKKFLGKIGISLILLLCLSTSYVYAFNEESKADNNSKENKTIYLTFDDGPSTNTNKVLDTLNEYNVKATFFLIGNQIKDQ
EEVVKRTQDEGHSIGLHTYTHDFKKIYSNNRTFIDEMLKCQEEIYRVTGTRPNIIRFPGGSVKRLNKGFKKELEEKHFKV
YDWNVDCQDGMKPKISPNRIFKKATESNVKDEPIILLMHCDYMQKNTCKALPEIIKFYKDKGYEFKTINNETPECYFPLR
K
>Mature_241_residues
MKKFLGKIGISLILLLCLSTSYVYAFNEESKADNNSKENKTIYLTFDDGPSTNTNKVLDTLNEYNVKATFFLIGNQIKDQ
EEVVKRTQDEGHSIGLHTYTHDFKKIYSNNRTFIDEMLKCQEEIYRVTGTRPNIIRFPGGSVKRLNKGFKKELEEKHFKV
YDWNVDCQDGMKPKISPNRIFKKATESNVKDEPIILLMHCDYMQKNTCKALPEIIKFYKDKGYEFKTINNETPECYFPLR
K

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28177; Mature: 28177

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLGKIGISLILLLCLSTSYVYAFNEESKADNNSKENKTIYLTFDDGPSTNTNKVLDT
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
LNEYNVKATFFLIGNQIKDQEEVVKRTQDEGHSIGLHTYTHDFKKIYSNNRTFIDEMLKC
HHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHH
QEEIYRVTGTRPNIIRFPGGSVKRLNKGFKKELEEKHFKVYDWNVDCQDGMKPKISPNRI
HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHH
FKKATESNVKDEPIILLMHCDYMQKNTCKALPEIIKFYKDKGYEFKTINNETPECYFPLR
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCC
K
C
>Mature Secondary Structure
MKKFLGKIGISLILLLCLSTSYVYAFNEESKADNNSKENKTIYLTFDDGPSTNTNKVLDT
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
LNEYNVKATFFLIGNQIKDQEEVVKRTQDEGHSIGLHTYTHDFKKIYSNNRTFIDEMLKC
HHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHH
QEEIYRVTGTRPNIIRFPGGSVKRLNKGFKKELEEKHFKVYDWNVDCQDGMKPKISPNRI
HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHH
FKKATESNVKDEPIILLMHCDYMQKNTCKALPEIIKFYKDKGYEFKTINNETPECYFPLR
HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]