Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is dagK [H]
Identifier: 226947421
GI number: 226947421
Start: 231694
End: 232578
Strand: Direct
Name: dagK [H]
Synonym: CLM_0249
Alternate gene names: 226947421
Gene position: 231694-232578 (Clockwise)
Preceding gene: 226947420
Following gene: 226947422
Centisome position: 5.58
GC content: 30.06
Gene sequence:
>885_bases ATGAGTAAGGTAAAATTTATATATAACCCATATTCAGGAGAAAAGGCTATAATATCTCAAATAGACAAAGTAATAAGAAT ACATCAGAAATATGGATATGAAGTAGTGCCTTATAGGATAAGTTTAGAATATGATCTTGATGATGCTTTTAAATCTATTG ATGAAAGCTATAAATATATATTAGTAGCAGGTGGAGATGGTACTGTAGACAATGTGGTAAATCATTTAAAAAAATTTTCA ATTGATCTTCCAATTGCAATATTACCTACAGGTACTGCTAATGATTTTGCTAAATTTATTGGTATGCCAACAAATGTTGG AGAGGCCTGTGAGCAAATACTAAAGAGCTCTGTAAAAAAGATTGATTTAGGAAAAATAAATGATAAATATTTTATTAATG TTGCTAGCACAGGACTATTTACAGATGTATCTCAAAAAACCGATGTTAATTTAAAGAATACTATGGGAAAACTTGCCTAC TATGTAAAGGGATTAGAGCAGCTTCCTAATTTCAGAAGATTAAAGGTTAATGTTAGATCTGAGGAAGTTAATTTTGATGG AGATATGTATCTTATGATGGTGTTCAATGGACAAACAGCAGGCAATCTTCATATGGCTTATAAGGCAGAAGTTGATGATG GCATGTTAGATGTAATAATAATAAAGGCTTGTGCTATTAAGGATATGATAGGATTATTTATAAAAATGATAAGAGGAGAT CATCTAGAAGATGTAAATGCTCTAATATATTTTAAAACAAATAAACTGGAAATAGAATCTAATGAAGAGATAGTTACGGA TATAGATGGAGAAAGAGGTCCAGACTTTCCTTTGCAGATAGAATGTGTAAAAGAAGGTTTGGATATTTTGGGCATATTAG ATTAA
Upstream 100 bases:
>100_bases AATATCCACAGGATTTATTGTTAAAATCTTGTGGATTTGCTATTATATAATGGTACAGCTAATTTAATTATAAAGTAAAA ACTATAAGAGGAGATTTGAA
Downstream 100 bases:
>100_bases TGTAGGAATATTTTAATTTTAATCTTAATAAATATAAGTAGTAGCATTGTTAAATTGGAGAGTTTATTTAATTATGATAA ATTTATTTATTTATATATCA
Product: putative lipid kinase
Products: NA
Alternate protein names: DAG kinase; DAGK [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSKVKFIYNPYSGEKAIISQIDKVIRIHQKYGYEVVPYRISLEYDLDDAFKSIDESYKYILVAGGDGTVDNVVNHLKKFS IDLPIAILPTGTANDFAKFIGMPTNVGEACEQILKSSVKKIDLGKINDKYFINVASTGLFTDVSQKTDVNLKNTMGKLAY YVKGLEQLPNFRRLKVNVRSEEVNFDGDMYLMMVFNGQTAGNLHMAYKAEVDDGMLDVIIIKACAIKDMIGLFIKMIRGD HLEDVNALIYFKTNKLEIESNEEIVTDIDGERGPDFPLQIECVKEGLDILGILD
Sequences:
>Translated_294_residues MSKVKFIYNPYSGEKAIISQIDKVIRIHQKYGYEVVPYRISLEYDLDDAFKSIDESYKYILVAGGDGTVDNVVNHLKKFS IDLPIAILPTGTANDFAKFIGMPTNVGEACEQILKSSVKKIDLGKINDKYFINVASTGLFTDVSQKTDVNLKNTMGKLAY YVKGLEQLPNFRRLKVNVRSEEVNFDGDMYLMMVFNGQTAGNLHMAYKAEVDDGMLDVIIIKACAIKDMIGLFIKMIRGD HLEDVNALIYFKTNKLEIESNEEIVTDIDGERGPDFPLQIECVKEGLDILGILD >Mature_293_residues SKVKFIYNPYSGEKAIISQIDKVIRIHQKYGYEVVPYRISLEYDLDDAFKSIDESYKYILVAGGDGTVDNVVNHLKKFSI DLPIAILPTGTANDFAKFIGMPTNVGEACEQILKSSVKKIDLGKINDKYFINVASTGLFTDVSQKTDVNLKNTMGKLAYY VKGLEQLPNFRRLKVNVRSEEVNFDGDMYLMMVFNGQTAGNLHMAYKAEVDDGMLDVIIIKACAIKDMIGLFIKMIRGDH LEDVNALIYFKTNKLEIESNEEIVTDIDGERGPDFPLQIECVKEGLDILGILD
Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthet
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=257, Percent_Identity=26.4591439688716, Blast_Score=105, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 33053; Mature: 32921
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVKFIYNPYSGEKAIISQIDKVIRIHQKYGYEVVPYRISLEYDLDDAFKSIDESYKYI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECHHHHHHHHCCCCEEE LVAGGDGTVDNVVNHLKKFSIDLPIAILPTGTANDFAKFIGMPTNVGEACEQILKSSVKK EEECCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHE IDLGKINDKYFINVASTGLFTDVSQKTDVNLKNTMGKLAYYVKGLEQLPNFRRLKVNVRS ECCCCCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC EEVNFDGDMYLMMVFNGQTAGNLHMAYKAEVDDGMLDVIIIKACAIKDMIGLFIKMIRGD CEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HLEDVNALIYFKTNKLEIESNEEIVTDIDGERGPDFPLQIECVKEGLDILGILD CCCCCCEEEEEECCEEEECCCCCEEEECCCCCCCCCCEEEHHHHCCCCEEEECC >Mature Secondary Structure SKVKFIYNPYSGEKAIISQIDKVIRIHQKYGYEVVPYRISLEYDLDDAFKSIDESYKYI CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECHHHHHHHHCCCCEEE LVAGGDGTVDNVVNHLKKFSIDLPIAILPTGTANDFAKFIGMPTNVGEACEQILKSSVKK EEECCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHE IDLGKINDKYFINVASTGLFTDVSQKTDVNLKNTMGKLAYYVKGLEQLPNFRRLKVNVRS ECCCCCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC EEVNFDGDMYLMMVFNGQTAGNLHMAYKAEVDDGMLDVIIIKACAIKDMIGLFIKMIRGD CEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HLEDVNALIYFKTNKLEIESNEEIVTDIDGERGPDFPLQIECVKEGLDILGILD CCCCCCEEEEEECCEEEECCCCCEEEECCCCCCCCCCEEEHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]