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The map label for this gene is yhcV [H]

Identifier: 226947420

GI number: 226947420

Start: 231172

End: 231588

Strand: Direct

Name: yhcV [H]

Synonym: CLM_0248

Alternate gene names: 226947420

Gene position: 231172-231588 (Clockwise)

Preceding gene: 226947418

Following gene: 226947421

Centisome position: 5.56

GC content: 32.85

Gene sequence:

>417_bases
ATGAAAGTTATGGATGTTATGACCCAAAATGTAGCAACGGTGAATAGAAATGATTCTGTAGAAAAGGCAGCTCAACTTAT
GAGTGAGCATAATGTCGGATCTATACCTATTTGTGATAATAATAAAGTGGTTGGAGTTATTACAGATAGGGACATAGCTT
TGAGATCTGTAGCAAAGGGATCAGATAATAATATTAAAGTTGGAGATATTATGACATCTAACCCTGTAGTGGCTAATAAA
GATATGGATATACATGATGCAGCTAGGATAATGAGTGAAAGACAAATAAGAAGATTACCTGTTGAGGATAATCAAAATAT
AGTAGGTATAGTTTCTTTAGGTGATATAGCTATAGAGCCTAAACATGAAAATGAAGCTCAAAAAGCTTTAAGTGGTATTT
CAGAGCAAAATAATTAG

Upstream 100 bases:

>100_bases
AATACCATTAAAAAGGAAAAATAATAATTAATTAAGAAATTTATAATAATTCTTAAATAAAAAATAGGTACGTGGATAAA
CTATGTTTGGAGGTGTTAGT

Downstream 100 bases:

>100_bases
GTTAAAATATCCACAGGATTTATTGTTAAAATCTTGTGGATTTGCTATTATATAATGGTACAGCTAATTTAATTATAAAG
TAAAAACTATAAGAGGAGAT

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKVMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDNNKVVGVITDRDIALRSVAKGSDNNIKVGDIMTSNPVVANK
DMDIHDAARIMSERQIRRLPVEDNQNIVGIVSLGDIAIEPKHENEAQKALSGISEQNN

Sequences:

>Translated_138_residues
MKVMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDNNKVVGVITDRDIALRSVAKGSDNNIKVGDIMTSNPVVANK
DMDIHDAARIMSERQIRRLPVEDNQNIVGIVSLGDIAIEPKHENEAQKALSGISEQNN
>Mature_138_residues
MKVMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDNNKVVGVITDRDIALRSVAKGSDNNIKVGDIMTSNPVVANK
DMDIHDAARIMSERQIRRLPVEDNQNIVGIVSLGDIAIEPKHENEAQKALSGISEQNN

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15045; Mature: 15045

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDNNKVVGVITDRDIALRSVAKG
CCHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHCC
SDNNIKVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVEDNQNIVGIVSLGDIAIEP
CCCCEEECEEECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEECC
KHENEAQKALSGISEQNN
CCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDNNKVVGVITDRDIALRSVAKG
CCHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHCC
SDNNIKVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVEDNQNIVGIVSLGDIAIEP
CCCCEEECEEECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEECC
KHENEAQKALSGISEQNN
CCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]