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The map label for this gene is spoIID [H]

Identifier: 226947384

GI number: 226947384

Start: 189049

End: 190125

Strand: Direct

Name: spoIID [H]

Synonym: CLM_0204

Alternate gene names: 226947384

Gene position: 189049-190125 (Clockwise)

Preceding gene: 226947383

Following gene: 226947385

Centisome position: 4.55

GC content: 27.11

Gene sequence:

>1077_bases
ATGAGAAGATTAAATAGGTATACTAATATTAATAAGTTAGTTATAACAATTATAAGTACTGTGTGCATTATGTTAATTTT
AAGTTTTGCTTTATCCTTTAGTGGAAACAAAGAACAAAAAGTTAGGGAAACTATAAGTAAAGTTAAGTTAGATCAGAAAA
GACAAGAAGAAAAGATTGATATAAATAAAAAATATAAAGTAAAATCAGAACCACAAGTTAGAGTTTACTTTGTTAATGAA
AAAGTTGTAAGATCAATACCCTTAGAGGAATATGTAAAGGGTGTTGTTTCAGCTGAAATGCCAGCGGAGTTTCATATAGA
AGCATTGAAAGCCCAAGCAGTAGCGGCTAGAACTTATGCTTTAGCTCACATGAAAGGGTTCGGTGAAAATCAATATAATA
AAAGAATAAATGCAGACGTGTGTGATAGTGTTCAATCTCAAGTTTTTATGCCTAAGGATAAAAGAATAAAATCTTGGCCA
AAGGAAAAGAGAAATGAATATTGGAGCAAAATAGAAGAAAGTGTTAATAGCACTAAGGGGAATGTACTTGTATATAACAA
TGAAATAGTTATGGCTCCATATTATTTTGCTACTAGTAATGGAAAAACAGAAGATAGTGAAAATGTATTTAATAGTGAAG
TTCCTTATTTAAAAAGTGTAAAAAGTCCAGGAGAAGAGAGGGCTCCTAAATTTAAGAGTAGCAAAAAAATTTCTTATGAT
CAATTTATAAAAATTATAAAAACTCAATATCCTAAGTGTACTATAAATAAAAAAGATATAAATAAAAAAATAATAATAAA
GGATAAAACAGAAAGTGGTAGTATTAAAAAAATTAAATTAGATAATATAGAAATTAAAGGTACAGAATTTAGAAAAATAT
TAGGCCTAAATTCATCTAAATTTTCATTAGAATTTAAAGATAACTATCTTATAGTAAATTGTAATGGGTATGGTCATAAT
GTTGGAATGAGTCAATGGGGGGCAAATAGTATGGGTAAATCAGGGAAAAAATATGATTATATACTTAAACATTACTATAA
AGGAGTAAATATGGAAATTCTCAAATATAGTGATTAG

Upstream 100 bases:

>100_bases
TAACAAAATTATAATTAAGTTTTAGCTTATATTTTAGCATAATAAACCTGTATGAAAAATATAATTGTATAGAAAACTTT
ATTATGAAAAGAGGGAAAAC

Downstream 100 bases:

>100_bases
TATTAATAAATTTATGGATTAACATCTATAGCTATAAGTTTTTTATATAACATAGAACTATAAACAAAGTTCTTGGCTTT
AGAGGGAGTCTTTACTCCCA

Product: stage II sporulation protein D

Products: NA

Alternate protein names: Stage II sporulation protein C [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSGNKEQKVRETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWSKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEERAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKLDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD

Sequences:

>Translated_358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSGNKEQKVRETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWSKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEERAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKLDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD
>Mature_358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSGNKEQKVRETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWSKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEERAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKLDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 41318; Mature: 41318

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSGNKEQKVRETISKVKLDQKRQEEKID
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
INKKYKVKSEPQVRVYFVNEKVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYA
CCCEEEECCCCCEEEEEECCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEKRNEYWSKIEESVNSTKG
HHHHHCCCCCHHCCCCCHHHHHHHHHCEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCCC
NVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEERAPKFKSSKKISYD
CEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCHH
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKLDNIEIKGTEFRKILGLNSSK
HHHHHHHHCCCCEECCHHCCCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHCCCCCE
FSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD
EEEEECCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSGNKEQKVRETISKVKLDQKRQEEKID
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
INKKYKVKSEPQVRVYFVNEKVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYA
CCCEEEECCCCCEEEEEECCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEKRNEYWSKIEESVNSTKG
HHHHHCCCCCHHCCCCCHHHHHHHHHCEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCCC
NVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEERAPKFKSSKKISYD
CEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCHH
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKLDNIEIKGTEFRKILGLNSSK
HHHHHHHHCCCCEECCHHCCCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHCCCCCE
FSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD
EEEEECCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3011962; 9384377 [H]