Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
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Accession | NC_012563 |
Length | 4,155,278 |
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The map label for this gene is pyrG [H]
Identifier: 226947355
GI number: 226947355
Start: 163374
End: 164975
Strand: Direct
Name: pyrG [H]
Synonym: CLM_0175
Alternate gene names: 226947355
Gene position: 163374-164975 (Clockwise)
Preceding gene: 226947354
Following gene: 226947356
Centisome position: 3.93
GC content: 31.34
Gene sequence:
>1602_bases ATGAGCACTAAATATATATTTGTAACAGGTGGTGTTGTTTCTTCATTAGGGAAAGGAATAACAGCAGCTTCTTTAGGAAG ACTTTTAAAAAATAGAGGACTTAAAGTTTCAATACAAAAATTTGATCCATATATAAATATAGATCCAGGAACAATGAGTC CTTATCAACATGGTGAAGTATTTGTAACAGAGGATGGTGCAGAAACAGATTTAGATTTAGGCCATTATGAAAGGTTTATA GATGAAAATTTAAGTCAAAATAGTAATGTAACTACAGGAAAGATTTACTGGTCTGTTATATCTAAAGAAAGAAAAGGTGA TTATTTAGGTGCTACAGTGCAGGTAATACCGCATATAACTACAGAAATAAAATCTAGAGTATATAGAGTCGCTAAAGAAA AAGAAGTAGATGTAGTTATAACTGAAATAGGTGGAACTATAGGAGATATAGAATCTCTACCTTTTTTAGAATCAATAAGG CAAATCAAATATGAGGTTGGAAGAGAAAATGTATGCTTTATTCATGTAACCTTACTACCCTTTCTAGGAAAAGCAGGTGA GTTAAAGACAAAGCCTACACAACACTCAGTTAAAGAACTTAGAGGAATAGGGATACAGCCAGATATCATAGTTTGTCGAT CAGAAAAACAGATACCAGAGGAACTAAAGGGGAAAATAGGATTATTTTGTAATGTAGATAAAGAAGATGTCATACAAAAT TTAGACGCAGAAAATCTTTATGAAGTACCATTAATGCTACATAAGGAAAATTTAGATACTTTAGTATGTAAGAAATTAGG CCTAAATTATAGTAAAATAGATAACACGGAATGGATATCAATGGTAAATAATGCAAAAAACCTTTCTAAGAATACTACCA TAGCTTTGGTAGGGAAGTATGTAGAATTACATGATGCTTATATATCAATAGTGGAAGCTTTAAACCATGGTGGTTATGCT AATGATACTAAGGTAAATATAAAATGGATAAATTCTGAAGAGGTAAATGAAAATAACTTTGAACAATGTTTAAAAGATGT GGATGGTATATTGGTACCAGGTGGATTTGGTGATAGAGGAATAGAAGGTAAAATATGGGCTGCTAAATGGGCAAGAGAAA ATAAAATACCTTTTTTAGGAATATGTCTTGGAATGCAATGTGCAGTAATAGAGTTTGCCAGAAATGTATTAAATTATAAA GGAGCTCATAGTGCAGAGATAGATCCAAATACAAAATATCCAGTAATAGATTTAATGCCAGAACAGAAAGATATAGATAA TATGGGTGGAACTATGAGATTGGGAGCTTATCCTTGTAAATTACTTAAGGGTACAAATTCAGAAAAAGCTTATGGTCAAG AGGTTGTATACGAAAGACATAGACATAGATATGAATTTAATAATGAATATAGGAGTAAATTAACAGAAGCAGGTTTAATA TTGTCAGGAACAAGTCCAGACGATAGATTAGTAGAAATAGTAGAGATAAATAATCATCCTTGGTATGTGGCTGTTCAATT TCACCCAGAATTAAAATCAAGACCCAATAAGCCACATCCATTATTTAAAAACTTTGTAAAGGCCACTTTGGATAAAAAAT AA
Upstream 100 bases:
>100_bases TAATGATGTCAATAGATTTTATGTAAATTTAGTGCACAATAATACAAACTTAAACTTTGGAGGTGAAAACTGCTTTATTA TATATTAAAGCAGGGGAGAT
Downstream 100 bases:
>100_bases ATTTTGTATACTAGTTAAAATTTAATATATGTTAATAAAGAACACCATCAGAATTTATAAAAATAAATAATTTTGGTGTT GTTTTTTTATTTATCCGATG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MSTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFI DENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHITTEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIR QIKYEVGRENVCFIHVTLLPFLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQN LDAENLYEVPLMLHKENLDTLVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKYVELHDAYISIVEALNHGGYA NDTKVNIKWINSEEVNENNFEQCLKDVDGILVPGGFGDRGIEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYK GAHSAEIDPNTKYPVIDLMPEQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEVVYERHRHRYEFNNEYRSKLTEAGLI LSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKNFVKATLDKK
Sequences:
>Translated_533_residues MSTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFI DENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHITTEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIR QIKYEVGRENVCFIHVTLLPFLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQN LDAENLYEVPLMLHKENLDTLVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKYVELHDAYISIVEALNHGGYA NDTKVNIKWINSEEVNENNFEQCLKDVDGILVPGGFGDRGIEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYK GAHSAEIDPNTKYPVIDLMPEQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEVVYERHRHRYEFNNEYRSKLTEAGLI LSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKNFVKATLDKK >Mature_532_residues STKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFID ENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHITTEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIRQ IKYEVGRENVCFIHVTLLPFLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQNL DAENLYEVPLMLHKENLDTLVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKYVELHDAYISIVEALNHGGYAN DTKVNIKWINSEEVNENNFEQCLKDVDGILVPGGFGDRGIEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYKG AHSAEIDPNTKYPVIDLMPEQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEVVYERHRHRYEFNNEYRSKLTEAGLIL SGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKNFVKATLDKK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=551, Percent_Identity=48.2758620689655, Blast_Score=504, Evalue=1e-143, Organism=Homo sapiens, GI28559085, Length=548, Percent_Identity=48.9051094890511, Blast_Score=501, Evalue=1e-142, Organism=Homo sapiens, GI28559083, Length=548, Percent_Identity=48.9051094890511, Blast_Score=501, Evalue=1e-142, Organism=Homo sapiens, GI221316689, Length=548, Percent_Identity=48.9051094890511, Blast_Score=501, Evalue=1e-142, Organism=Escherichia coli, GI1789142, Length=539, Percent_Identity=56.0296846011132, Blast_Score=609, Evalue=1e-175, Organism=Caenorhabditis elegans, GI25148299, Length=600, Percent_Identity=38.3333333333333, Blast_Score=413, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6319432, Length=558, Percent_Identity=45.3405017921147, Blast_Score=477, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6322563, Length=560, Percent_Identity=45.5357142857143, Blast_Score=471, Evalue=1e-133, Organism=Drosophila melanogaster, GI24664469, Length=550, Percent_Identity=48.9090909090909, Blast_Score=509, Evalue=1e-144, Organism=Drosophila melanogaster, GI21357815, Length=495, Percent_Identity=47.0707070707071, Blast_Score=434, Evalue=1e-122,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59945; Mature: 59814
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEV CCCEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIDENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHIT EEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEHEEEEEEHHHHCCCCCCCCHHHHHHHHH TEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIRQIKYEVGRENVCFIHVTLLP HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHH FLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQN HCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHCCCEEEEEECCHHHHHHC LDAENLYEVPLMLHKENLDTLVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKY CCCCCHHHCCEEEECCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEEEHH VELHDAYISIVEALNHGGYANDTKVNIKWINSEEVNENNFEQCLKDVDGILVPGGFGDRG HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEECCCCCCCC IEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYKGAHSAEIDPNTKYPVIDLMP CCCCEEEEECCCCCCCCEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC EQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEVVYERHRHRYEFNNEYRSKLTEAGLI CCCCHHHCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEE LSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKNFVKATLDKK EECCCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure STKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYINIDPGTMSPYQHGEV CCEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIDENLSQNSNVTTGKIYWSVISKERKGDYLGATVQVIPHIT EEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEHEEEEEEHHHHCCCCCCCCHHHHHHHHH TEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIRQIKYEVGRENVCFIHVTLLP HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHH FLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEELKGKIGLFCNVDKEDVIQN HCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHCCCEEEEEECCHHHHHHC LDAENLYEVPLMLHKENLDTLVCKKLGLNYSKIDNTEWISMVNNAKNLSKNTTIALVGKY CCCCCHHHCCEEEECCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEEEHH VELHDAYISIVEALNHGGYANDTKVNIKWINSEEVNENNFEQCLKDVDGILVPGGFGDRG HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEECCCCCCCC IEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNYKGAHSAEIDPNTKYPVIDLMP CCCCEEEEECCCCCCCCEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC EQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEVVYERHRHRYEFNNEYRSKLTEAGLI CCCCHHHCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEE LSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNKPHPLFKNFVKATLDKK EECCCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA