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The map label for this gene is lacE [H]

Identifier: 226947330

GI number: 226947330

Start: 137001

End: 138275

Strand: Direct

Name: lacE [H]

Synonym: CLM_0150

Alternate gene names: 226947330

Gene position: 137001-138275 (Clockwise)

Preceding gene: 226947329

Following gene: 226947332

Centisome position: 3.3

GC content: 24.55

Gene sequence:

>1275_bases
ATGAAGAAAAAGAAATTTATTTATATAGGTATTGTTGTAATATTAATAGTAGCTATAATATTAGTTATTTTGGGTAGATA
TAATAATACTAAGAATTTTACAAAAGATAAATTAGTTATATGGGGAGATGTTAAAAATAATCAGGCTATGAATGAAGGGG
TCAAAGCCTTTAAAGAAAAATATCCTAATGTAGAAGTAGAGTTTTATAATAAAAATAGGGAGAATATGATAGATGAATTT
TCAAAAATAAAAGATAAAAATTCCTATCCTAATATAATATGCTTAGATGATAAGGATATAAAAGAGTTTGGAGCAAGATA
CTATAAAGATTTAATTATATTAAATGAAATTATGAAAAATAATATAAAGGACTTTATTTCTTGCAAAAGAGAGTTAGTTA
AGCTATATGATAACTTTATTGCTGTTCCCTACACAGTAGAGCCTGTAGCATTATATTATAGAAAAGATTTATTAGAAAAG
TATAATATAAATAGCGAAGATATAAAAACTTGGGATGACTTTATAAAAGCTGGTGAGGAAATATACAAAAAAAGCAATGG
GAAAGTAAAAATGATATCCTTTAACAAAAGCGATAACAGTATGCTTGAAGTTTTATTAAATGAAAAAGGAATTTACTATT
TTGATAAAGATAGTAAATTACAAATAGATCAACCTGGCTATATAGATGCCTTTAATATTTTAAAGAGAATAGAATCATCT
AATATCGATTTTGATAACAAGGGAGATTTTAAATTATTTGTTAATAATAGCAATGTAGTATGTATTCCATATAATTCAGA
GTTAGCTAATCATTTAATAAGTGGAAGAAAGCAAGAAAACGGTAAATGGAAAATAATGAAATTACCATCCTTTGAAGTAG
GAGGTAAAAATTCTGCAATTGCAGGAGGTACTTCTATTGTTGGAATAAAATCTTGCAAGGAATCTAAAGATAAATTATCG
ATGGAACTGATAAAAAATATAGCACTAAATAAGCAAAGTTTAAATAAAGGATTTTTAAATTATGGACAATTCCCAGCTTA
TAAACCGACTTATGAGTATGCTAGATTCTTTCAAAATGTAAACTATTTTAATGAGGAAAAAATTTGGAGGGTTTTTGTTG
ATATAGCAAGTAAAGCTCCAAGTATAAATTATACTAAGAATTACAATTCTGTACAAAAAATTATGACAGATTTTAAGAAA
GAGTTATTAAATAGTAATGACGTAGAAAAAGAGTTAAAAAATATAAAAATTTTTATTAATAGTATAACAAAATAA

Upstream 100 bases:

>100_bases
ATTTAAGCTTCATTAAGTTGAATATAATTATATAATAATATATTATAGTTATAGTATATATTTTAAAGATATTAATATAA
GGCCTTTAAGGGAGGTTAAA

Downstream 100 bases:

>100_bases
GAATAAGATATATAAAAAATATAATTTTATTAATTATATATTTACATTAAAAAAGTATTTAAGAGTCAAAATTTAAGAAA
AAATTTTGGCTCTTTTTTAT

Product: putative arabinose-binding protein

Products: NA

Alternate protein names: LBP [H]

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKKKKFIYIGIVVILIVAIILVILGRYNNTKNFTKDKLVIWGDVKNNQAMNEGVKAFKEKYPNVEVEFYNKNRENMIDEF
SKIKDKNSYPNIICLDDKDIKEFGARYYKDLIILNEIMKNNIKDFISCKRELVKLYDNFIAVPYTVEPVALYYRKDLLEK
YNINSEDIKTWDDFIKAGEEIYKKSNGKVKMISFNKSDNSMLEVLLNEKGIYYFDKDSKLQIDQPGYIDAFNILKRIESS
NIDFDNKGDFKLFVNNSNVVCIPYNSELANHLISGRKQENGKWKIMKLPSFEVGGKNSAIAGGTSIVGIKSCKESKDKLS
MELIKNIALNKQSLNKGFLNYGQFPAYKPTYEYARFFQNVNYFNEEKIWRVFVDIASKAPSINYTKNYNSVQKIMTDFKK
ELLNSNDVEKELKNIKIFINSITK

Sequences:

>Translated_424_residues
MKKKKFIYIGIVVILIVAIILVILGRYNNTKNFTKDKLVIWGDVKNNQAMNEGVKAFKEKYPNVEVEFYNKNRENMIDEF
SKIKDKNSYPNIICLDDKDIKEFGARYYKDLIILNEIMKNNIKDFISCKRELVKLYDNFIAVPYTVEPVALYYRKDLLEK
YNINSEDIKTWDDFIKAGEEIYKKSNGKVKMISFNKSDNSMLEVLLNEKGIYYFDKDSKLQIDQPGYIDAFNILKRIESS
NIDFDNKGDFKLFVNNSNVVCIPYNSELANHLISGRKQENGKWKIMKLPSFEVGGKNSAIAGGTSIVGIKSCKESKDKLS
MELIKNIALNKQSLNKGFLNYGQFPAYKPTYEYARFFQNVNYFNEEKIWRVFVDIASKAPSINYTKNYNSVQKIMTDFKK
ELLNSNDVEKELKNIKIFINSITK
>Mature_424_residues
MKKKKFIYIGIVVILIVAIILVILGRYNNTKNFTKDKLVIWGDVKNNQAMNEGVKAFKEKYPNVEVEFYNKNRENMIDEF
SKIKDKNSYPNIICLDDKDIKEFGARYYKDLIILNEIMKNNIKDFISCKRELVKLYDNFIAVPYTVEPVALYYRKDLLEK
YNINSEDIKTWDDFIKAGEEIYKKSNGKVKMISFNKSDNSMLEVLLNEKGIYYFDKDSKLQIDQPGYIDAFNILKRIESS
NIDFDNKGDFKLFVNNSNVVCIPYNSELANHLISGRKQENGKWKIMKLPSFEVGGKNSAIAGGTSIVGIKSCKESKDKLS
MELIKNIALNKQSLNKGFLNYGQFPAYKPTYEYARFFQNVNYFNEEKIWRVFVDIASKAPSINYTKNYNSVQKIMTDFKK
ELLNSNDVEKELKNIKIFINSITK

Specific function: Part of the binding-protein-dependent transport system for lactose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 49365; Mature: 49365

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKFIYIGIVVILIVAIILVILGRYNNTKNFTKDKLVIWGDVKNNQAMNEGVKAFKEK
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
YPNVEVEFYNKNRENMIDEFSKIKDKNSYPNIICLDDKDIKEFGARYYKDLIILNEIMKN
CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
NIKDFISCKRELVKLYDNFIAVPYTVEPVALYYRKDLLEKYNINSEDIKTWDDFIKAGEE
HHHHHHHHHHHHHHHHHHHEECCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IYKKSNGKVKMISFNKSDNSMLEVLLNEKGIYYFDKDSKLQIDQPGYIDAFNILKRIESS
HHHCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHC
NIDFDNKGDFKLFVNNSNVVCIPYNSELANHLISGRKQENGKWKIMKLPSFEVGGKNSAI
CCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCC
AGGTSIVGIKSCKESKDKLSMELIKNIALNKQSLNKGFLNYGQFPAYKPTYEYARFFQNV
CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
NYFNEEKIWRVFVDIASKAPSINYTKNYNSVQKIMTDFKKELLNSNDVEKELKNIKIFIN
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
SITK
CCCC
>Mature Secondary Structure
MKKKKFIYIGIVVILIVAIILVILGRYNNTKNFTKDKLVIWGDVKNNQAMNEGVKAFKEK
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
YPNVEVEFYNKNRENMIDEFSKIKDKNSYPNIICLDDKDIKEFGARYYKDLIILNEIMKN
CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
NIKDFISCKRELVKLYDNFIAVPYTVEPVALYYRKDLLEKYNINSEDIKTWDDFIKAGEE
HHHHHHHHHHHHHHHHHHHEECCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IYKKSNGKVKMISFNKSDNSMLEVLLNEKGIYYFDKDSKLQIDQPGYIDAFNILKRIESS
HHHCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHC
NIDFDNKGDFKLFVNNSNVVCIPYNSELANHLISGRKQENGKWKIMKLPSFEVGGKNSAI
CCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCC
AGGTSIVGIKSCKESKDKLSMELIKNIALNKQSLNKGFLNYGQFPAYKPTYEYARFFQNV
CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
NYFNEEKIWRVFVDIASKAPSINYTKNYNSVQKIMTDFKKELLNSNDVEKELKNIKIFIN
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEE
SITK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1630315; 2318800 [H]