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The map label for this gene is 226947329

Identifier: 226947329

GI number: 226947329

Start: 135432

End: 136814

Strand: Direct

Name: 226947329

Synonym: CLM_0149

Alternate gene names: NA

Gene position: 135432-136814 (Clockwise)

Preceding gene: 226947328

Following gene: 226947330

Centisome position: 3.26

GC content: 30.01

Gene sequence:

>1383_bases
ATGAAAGTCATAAAATTATTAGAAAAATCTGCTAAAGACAAAATGATAAAGACTGCAGCAGGTTTACTTAGTACGAACCC
CGAAAAAAATGTAGACAGATTATTTACATTAATAGAAAAAACCATAGCTAAAGATGAGGATAATTTAAAAAGATTAAAAG
TTGTAGAAGATGAGTATCATAATAATCCATCCACGCATGAATTTGTACAAAATTTATTTAAAACCACGGATAAAAATTGT
ATACAAAAATTTTTCACAAATTTTTTTGCAAATGCTGTTTGGTACGGAATGCCAAAGAGAGAAAAACTTTTTAAAGAAGA
TGGAATAAAAACACCTTTTGTAATATTAATAAGCCCGTCTATGAGATGTAATTTAAGATGCACAGGTTGTTACGCTGCAA
ATTATAGTAAAGAAGATGATATTCCTTATGAAGAAGTAGATAGAATAATTGAAGAAGCTAGAGAGATCGGAATATACTAT
TTTATAGTATTAGGTGGAGAACCTTTTTTTAACGAATATATGCTAGATATTTATGAAAAATACAACGATTGTATTTTTAT
GCCTTTTACAAATGGAACTTTGTTTAATGAAAAATTAGCAGATAAAGTTCAAAAGTTAGGTAATATAATACCAATGTTTT
CATTAGAAGGTTTTGAAAAAGAAACAGATGCTAGAAGAGGAAAAGGTGTATTTAAACAAGTTATGCATGGAATGGATCTA
TTAAGAGAAAGAGGGGTTCTGTTTGGAGTCTCTACAGCTACGGGAAGAAATAACATAGATACAGTCATTTCAGATGAGTT
CATTAATATGCTAATAGAAAAAGGGGCCAAAATGAGTTGGTATTTCATATTTATGCCAGTAGGTGAGGATCCAGATTTTA
ACTTAATGCTAACACCAGAGCAAAGAATATATTTAGGAAAAGAAGTCAGAAAAATAAGAAATGAGAAGCCATATTTTGCT
ATAGATTTCTTTAATGATGCTCCATATGTTGGTGGTTGCATAGCGGGAAAATATTATTGTCATATAAATTCACATGAAGA
TGTAGAGCCATGCATATTTGCTCATTTTGCTACAGACAATTTAAAAAATAAGAAATTAATAGATGTATTTAAGTCACCTT
TCTTTAAGGAGTTAAGAGATAGACAGCCATACAATGATAACTTATTAAAACCATGTATGATGATAGATAATCCTAAAGTT
ATAAGGGAAGTAGCAAGTAAAACAGGGGCTAGACCGACAGATAAAGGAGCAGAAATGATGCTCCATGATGAAGTATTTAA
AAGTAAATTAGACAAATTAGCTAAAGATTTTGATCCTTTAGCAGAAAAAGCTTGGAAAGAAGATTTTCATGGAAAAGGAA
ATTACGAAATGTCAAAGGGCTAA

Upstream 100 bases:

>100_bases
AATTAGTCAATTGGTAATATAATGGTTATAAGTAATCATAATTCGTGATAAATTATAGTTAAGGTTAAAAATAATTTTAT
TTTATCGGGAGGGAGCTTAT

Downstream 100 bases:

>100_bases
AACAAATTAATCTTATATAAATTAAGGTATTTCATTTTAATGAGATACCTTTTTATTTATTCTATAGGCATTTATAAAGC
TTTTTAATTTAAGCTTCATT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Radical SAM Family Protein; Fe-S Oxidoreductases; Metallo Cofactor Biosynthesis Protein; AstB/ChuR-Related Protein; MoaA/NirJ Family Fe-S Oxidoreductase; Radical SAM Superfamily Protein; Heme Biosynthesis Protein; Radical SAM Family Fe-S Protein; Heme D1 Biosynthesis Protein NirJ; Co PQQ Biosynthesis Protein E; Fe-S Oxidoreductase Of MoeA/NarA Subfamily; Fe-S Oxidoreductase Component Of Heme Biosynthesis; MoeA/NarA Subfamily Fe-S Oxidoreductase; Biosynthetic Heme Protein; Co PQQ Synthesis Protein; Radical Sam

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKVIKLLEKSAKDKMIKTAAGLLSTNPEKNVDRLFTLIEKTIAKDEDNLKRLKVVEDEYHNNPSTHEFVQNLFKTTDKNC
IQKFFTNFFANAVWYGMPKREKLFKEDGIKTPFVILISPSMRCNLRCTGCYAANYSKEDDIPYEEVDRIIEEAREIGIYY
FIVLGGEPFFNEYMLDIYEKYNDCIFMPFTNGTLFNEKLADKVQKLGNIIPMFSLEGFEKETDARRGKGVFKQVMHGMDL
LRERGVLFGVSTATGRNNIDTVISDEFINMLIEKGAKMSWYFIFMPVGEDPDFNLMLTPEQRIYLGKEVRKIRNEKPYFA
IDFFNDAPYVGGCIAGKYYCHINSHEDVEPCIFAHFATDNLKNKKLIDVFKSPFFKELRDRQPYNDNLLKPCMMIDNPKV
IREVASKTGARPTDKGAEMMLHDEVFKSKLDKLAKDFDPLAEKAWKEDFHGKGNYEMSKG

Sequences:

>Translated_460_residues
MKVIKLLEKSAKDKMIKTAAGLLSTNPEKNVDRLFTLIEKTIAKDEDNLKRLKVVEDEYHNNPSTHEFVQNLFKTTDKNC
IQKFFTNFFANAVWYGMPKREKLFKEDGIKTPFVILISPSMRCNLRCTGCYAANYSKEDDIPYEEVDRIIEEAREIGIYY
FIVLGGEPFFNEYMLDIYEKYNDCIFMPFTNGTLFNEKLADKVQKLGNIIPMFSLEGFEKETDARRGKGVFKQVMHGMDL
LRERGVLFGVSTATGRNNIDTVISDEFINMLIEKGAKMSWYFIFMPVGEDPDFNLMLTPEQRIYLGKEVRKIRNEKPYFA
IDFFNDAPYVGGCIAGKYYCHINSHEDVEPCIFAHFATDNLKNKKLIDVFKSPFFKELRDRQPYNDNLLKPCMMIDNPKV
IREVASKTGARPTDKGAEMMLHDEVFKSKLDKLAKDFDPLAEKAWKEDFHGKGNYEMSKG
>Mature_460_residues
MKVIKLLEKSAKDKMIKTAAGLLSTNPEKNVDRLFTLIEKTIAKDEDNLKRLKVVEDEYHNNPSTHEFVQNLFKTTDKNC
IQKFFTNFFANAVWYGMPKREKLFKEDGIKTPFVILISPSMRCNLRCTGCYAANYSKEDDIPYEEVDRIIEEAREIGIYY
FIVLGGEPFFNEYMLDIYEKYNDCIFMPFTNGTLFNEKLADKVQKLGNIIPMFSLEGFEKETDARRGKGVFKQVMHGMDL
LRERGVLFGVSTATGRNNIDTVISDEFINMLIEKGAKMSWYFIFMPVGEDPDFNLMLTPEQRIYLGKEVRKIRNEKPYFA
IDFFNDAPYVGGCIAGKYYCHINSHEDVEPCIFAHFATDNLKNKKLIDVFKSPFFKELRDRQPYNDNLLKPCMMIDNPKV
IREVASKTGARPTDKGAEMMLHDEVFKSKLDKLAKDFDPLAEKAWKEDFHGKGNYEMSKG

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53298; Mature: 53298

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIKLLEKSAKDKMIKTAAGLLSTNPEKNVDRLFTLIEKTIAKDEDNLKRLKVVEDEYH
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
NNPSTHEFVQNLFKTTDKNCIQKFFTNFFANAVWYGMPKREKLFKEDGIKTPFVILISPS
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCC
MRCNLRCTGCYAANYSKEDDIPYEEVDRIIEEAREIGIYYFIVLGGEPFFNEYMLDIYEK
CEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHH
YNDCIFMPFTNGTLFNEKLADKVQKLGNIIPMFSLEGFEKETDARRGKGVFKQVMHGMDL
HCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRERGVLFGVSTATGRNNIDTVISDEFINMLIEKGAKMSWYFIFMPVGEDPDFNLMLTPE
HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEECCH
QRIYLGKEVRKIRNEKPYFAIDFFNDAPYVGGCIAGKYYCHINSHEDVEPCIFAHFATDN
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCCCHHEEEEECCCC
LKNKKLIDVFKSPFFKELRDRQPYNDNLLKPCMMIDNPKVIREVASKTGARPTDKGAEMM
CCCCHHHHHHHCHHHHHHHCCCCCCCCHHCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHH
LHDEVFKSKLDKLAKDFDPLAEKAWKEDFHGKGNYEMSKG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKVIKLLEKSAKDKMIKTAAGLLSTNPEKNVDRLFTLIEKTIAKDEDNLKRLKVVEDEYH
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
NNPSTHEFVQNLFKTTDKNCIQKFFTNFFANAVWYGMPKREKLFKEDGIKTPFVILISPS
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCC
MRCNLRCTGCYAANYSKEDDIPYEEVDRIIEEAREIGIYYFIVLGGEPFFNEYMLDIYEK
CEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHH
YNDCIFMPFTNGTLFNEKLADKVQKLGNIIPMFSLEGFEKETDARRGKGVFKQVMHGMDL
HCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRERGVLFGVSTATGRNNIDTVISDEFINMLIEKGAKMSWYFIFMPVGEDPDFNLMLTPE
HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEECCH
QRIYLGKEVRKIRNEKPYFAIDFFNDAPYVGGCIAGKYYCHINSHEDVEPCIFAHFATDN
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCCCHHEEEEECCCC
LKNKKLIDVFKSPFFKELRDRQPYNDNLLKPCMMIDNPKVIREVASKTGARPTDKGAEMM
CCCCHHHHHHHCHHHHHHHCCCCCCCCHHCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHH
LHDEVFKSKLDKLAKDFDPLAEKAWKEDFHGKGNYEMSKG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA