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The map label for this gene is 226225364

Identifier: 226225364

GI number: 226225364

Start: 2866026

End: 2866553

Strand: Reverse

Name: 226225364

Synonym: Lm4b_02787

Alternate gene names: NA

Gene position: 2866553-2866026 (Counterclockwise)

Preceding gene: 226225366

Following gene: 226225363

Centisome position: 98.42

GC content: 39.77

Gene sequence:

>528_bases
ATGGCGAGACTATCACAAGAAATTATTTTAAATATGGCAGAGAAAATCATTTACGAAAAAGGCATGGAAAAAACGACGCT
GTATGATATTGCGGGTAATTTGAACGTCACACATGCGGCACTTTATAAGCATTATCGAAATAAAGAGGATTTATTTCAAA
AATTGGCGCTACGTTGGTTAGAGGAAACTTCGCGGGAGATTTTCGATTGGACACAGGACGCAGGGCAAACACCAGATGAT
GCGCTTCACGACTGGCTTTGGCTCTTGGCCGATACTAAGAAAAAACGATACAAAACCGACCGAAAAATGTTTTTACTTTA
TACGGATTATATTGAACAAAATGAAGAATTAGTGAAAAACCACGTAGCCCATTTAGCACAAAAAGCCGAAGAAGTGAGCG
GTCGAACGAACCAAGGAAACGCGATTATTACGGCGTTCACTTATTTTCATAATCCTTATTTTGCAAGCAGGTGGGAACAA
GCGGGTTATGCGGAGTTATTTGAGGATGTTTGGCAGATTGTGAAATAA

Upstream 100 bases:

>100_bases
TTGGAAGTATACTCCTTTTAGTTACTTTGTCAAGGATTTGTAACTTTTCTGTTTTCCTGTATAATAAAAAGCAAAGAATG
AGTTGAATCGAGGGGTTAAA

Downstream 100 bases:

>100_bases
AAATAAAGAGAGGGCTAATTTACATGACTGAAAATACAACTATTGCTAAACGAATATTGCAGTTTAATGAGGCGCTTGCG
AATAGTTCGTTTGATTTGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Tetr-Family Transcriptional Regulator

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MARLSQEIILNMAEKIIYEKGMEKTTLYDIAGNLNVTHAALYKHYRNKEDLFQKLALRWLEETSREIFDWTQDAGQTPDD
ALHDWLWLLADTKKKRYKTDRKMFLLYTDYIEQNEELVKNHVAHLAQKAEEVSGRTNQGNAIITAFTYFHNPYFASRWEQ
AGYAELFEDVWQIVK

Sequences:

>Translated_175_residues
MARLSQEIILNMAEKIIYEKGMEKTTLYDIAGNLNVTHAALYKHYRNKEDLFQKLALRWLEETSREIFDWTQDAGQTPDD
ALHDWLWLLADTKKKRYKTDRKMFLLYTDYIEQNEELVKNHVAHLAQKAEEVSGRTNQGNAIITAFTYFHNPYFASRWEQ
AGYAELFEDVWQIVK
>Mature_174_residues
ARLSQEIILNMAEKIIYEKGMEKTTLYDIAGNLNVTHAALYKHYRNKEDLFQKLALRWLEETSREIFDWTQDAGQTPDDA
LHDWLWLLADTKKKRYKTDRKMFLLYTDYIEQNEELVKNHVAHLAQKAEEVSGRTNQGNAIITAFTYFHNPYFASRWEQA
GYAELFEDVWQIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20771; Mature: 20639

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSQEIILNMAEKIIYEKGMEKTTLYDIAGNLNVTHAALYKHYRNKEDLFQKLALRWL
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
EETSREIFDWTQDAGQTPDDALHDWLWLLADTKKKRYKTDRKMFLLYTDYIEQNEELVKN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHCCHHHHHH
HVAHLAQKAEEVSGRTNQGNAIITAFTYFHNPYFASRWEQAGYAELFEDVWQIVK
HHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCHHHHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
ARLSQEIILNMAEKIIYEKGMEKTTLYDIAGNLNVTHAALYKHYRNKEDLFQKLALRWL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
EETSREIFDWTQDAGQTPDDALHDWLWLLADTKKKRYKTDRKMFLLYTDYIEQNEELVKN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHCCHHHHHH
HVAHLAQKAEEVSGRTNQGNAIITAFTYFHNPYFASRWEQAGYAELFEDVWQIVK
HHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCHHHHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA