| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is chbC [H]
Identifier: 226225315
GI number: 226225315
Start: 2816776
End: 2818128
Strand: Direct
Name: chbC [H]
Synonym: Lm4b_02738
Alternate gene names: 226225315
Gene position: 2816776-2818128 (Clockwise)
Preceding gene: 226225314
Following gene: 226225316
Centisome position: 96.71
GC content: 40.87
Gene sequence:
>1353_bases ATGAGTATAATGTCAAAATTTGAACACGGCATGGAACGTGTTTTAGTACCAGTTGCGAATAAATTGAACTCGCAGCGCCA TATTGCAGCAATTCGTGATGCATTTATTTTAGTTTTCCCATTAATTATGGCTGGTTCAATTATCACTTTGATTAACTTCG CAGTATTATCACCAGATGGCTTTATTGCAAAAATCTTATTCCTAGGGAAAATTTTCCCTAATTTAGCCGATGCACAGGCT GTATTTTCGCCAGTAATGCAAGGTTCGACCAATATTATGGCCATTCTGATCGTATTCTTAGTCGCACGGAATCTCGCCAT CTTCTTTAAACAGGATGATTTGCTCTGTGGACTGACCTCGATAGGTGCATTCTTTATCGTGTATACACCTTACACAGTAG TTGACAATGCATCTTACATGACAATCAAATTCTTAGGAGCACAAGGTCTTTTCGTTGCTATTATTGTAGCGATTATTACT GGGGAAGTATTTAGCCGTCTAGCTAGATCCCCTCGTTTAATGATCAAAATGCCTGACCAAGTACCACCAGCAGTTGCTCG TTCTTTTAAAGTATTAATTCCAGTTATCATCATCACTATTCTTTTCTCTGTCATTAACTACTTAATCACTTTAATCGCTC CAGAAGGTTTAAACGACCTTGTTTACACAGTTATTCAAGCGCCACTTAAAGACATGGGAACTAACGTATTCTCTGTAATT ATCATCGGGCTTGTTTCTAACTTACTTTGGGTTCTTGGTATTCACGGGCCTAACACTGTTGCGGCTATTCGTGACACCAT CTTCACTGAACCAAACTTAGATAACTTATCTTACGTAGCACAGCACGGTTCTGCTTGGGGAGCTCCATACCCAGCAACAT GGGCTGGCCTAAATGACGGATTTGCAAACTACGGCGGATCTGGTATGACTCTAGGTTTACTGATTGCTATCTTTATCGCT TCTCGTCGTGCAGACTACCGCGATATCGCGAAACTTTCTCTTGCACCAGGGATTTTCAACATCAATGAACCAGTTATTTT CGGTTTACCAATCGTATTAAACCCAATTATGGTTATTCCTTTCATCATTACACCAGCAATCAATACATTAATTGGTTACT TCTTTATCTCAACAAAACTTATTCCACCTGTCGCCTATCAAGTGCCTTGGACAACTCCAGGACCACTGATTCCATTCCTT GGTACAGGAGGAAACTGGCTCGCGCTTCTGGTCGGCTTGCTCTGTCTAGCCGTCGCAACAGTCATTTATCTACCATTCGT ACTTGTATCTAACAAAATTGCCGCGAGTGATGCTGCAATGGACAAAAATGCAACAGCCTCAACAGAACAATAG
Upstream 100 bases:
>100_bases ATATGAAAGATTATGGTATGTTAAACGGGAAAGCCGTTCTTGAAAAAGCTTTCGCGGAGATTGGTTAAGGGAGATTCATT CAAAATAGGGAGGTTTTAAA
Downstream 100 bases:
>100_bases GATGTGACAAAATGAAAATTGCAGCTTTTGATATCGGTGGAACGGCCCTTAAAATGGGGGTCGTTTTGCCGCATGGTGAA ATTATACTAACAAAATCCGC
Product: PTS cellobiose-specific enzyme IIC
Products: pyruvate; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm] [C]
Alternate protein names: EIIC-Chb; PTS system N,N'-diacetylchitobiose-specific EIIC component [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSIMSKFEHGMERVLVPVANKLNSQRHIAAIRDAFILVFPLIMAGSIITLINFAVLSPDGFIAKILFLGKIFPNLADAQA VFSPVMQGSTNIMAILIVFLVARNLAIFFKQDDLLCGLTSIGAFFIVYTPYTVVDNASYMTIKFLGAQGLFVAIIVAIIT GEVFSRLARSPRLMIKMPDQVPPAVARSFKVLIPVIIITILFSVINYLITLIAPEGLNDLVYTVIQAPLKDMGTNVFSVI IIGLVSNLLWVLGIHGPNTVAAIRDTIFTEPNLDNLSYVAQHGSAWGAPYPATWAGLNDGFANYGGSGMTLGLLIAIFIA SRRADYRDIAKLSLAPGIFNINEPVIFGLPIVLNPIMVIPFIITPAINTLIGYFFISTKLIPPVAYQVPWTTPGPLIPFL GTGGNWLALLVGLLCLAVATVIYLPFVLVSNKIAASDAAMDKNATASTEQ
Sequences:
>Translated_450_residues MSIMSKFEHGMERVLVPVANKLNSQRHIAAIRDAFILVFPLIMAGSIITLINFAVLSPDGFIAKILFLGKIFPNLADAQA VFSPVMQGSTNIMAILIVFLVARNLAIFFKQDDLLCGLTSIGAFFIVYTPYTVVDNASYMTIKFLGAQGLFVAIIVAIIT GEVFSRLARSPRLMIKMPDQVPPAVARSFKVLIPVIIITILFSVINYLITLIAPEGLNDLVYTVIQAPLKDMGTNVFSVI IIGLVSNLLWVLGIHGPNTVAAIRDTIFTEPNLDNLSYVAQHGSAWGAPYPATWAGLNDGFANYGGSGMTLGLLIAIFIA SRRADYRDIAKLSLAPGIFNINEPVIFGLPIVLNPIMVIPFIITPAINTLIGYFFISTKLIPPVAYQVPWTTPGPLIPFL GTGGNWLALLVGLLCLAVATVIYLPFVLVSNKIAASDAAMDKNATASTEQ >Mature_449_residues SIMSKFEHGMERVLVPVANKLNSQRHIAAIRDAFILVFPLIMAGSIITLINFAVLSPDGFIAKILFLGKIFPNLADAQAV FSPVMQGSTNIMAILIVFLVARNLAIFFKQDDLLCGLTSIGAFFIVYTPYTVVDNASYMTIKFLGAQGLFVAIIVAIITG EVFSRLARSPRLMIKMPDQVPPAVARSFKVLIPVIIITILFSVINYLITLIAPEGLNDLVYTVIQAPLKDMGTNVFSVII IGLVSNLLWVLGIHGPNTVAAIRDTIFTEPNLDNLSYVAQHGSAWGAPYPATWAGLNDGFANYGGSGMTLGLLIAIFIAS RRADYRDIAKLSLAPGIFNINEPVIFGLPIVLNPIMVIPFIITPAINTLIGYFFISTKLIPPVAYQVPWTTPGPLIPFLG TGGNWLALLVGLLCLAVATVIYLPFVLVSNKIAASDAAMDKNATASTEQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788032, Length=456, Percent_Identity=38.1578947368421, Blast_Score=253, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003352 - InterPro: IPR004796 - InterPro: IPR004501 [H]
Pfam domain/function: PF02378 PTS_EIIC [H]
EC number: NA
Molecular weight: Translated: 48569; Mature: 48438
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS51105 PTS_EIIC_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMSKFEHGMERVLVPVANKLNSQRHIAAIRDAFILVFPLIMAGSIITLINFAVLSPDG CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FIAKILFLGKIFPNLADAQAVFSPVMQGSTNIMAILIVFLVARNLAIFFKQDDLLCGLTS HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHH IGAFFIVYTPYTVVDNASYMTIKFLGAQGLFVAIIVAIITGEVFSRLARSPRLMIKMPDQ HHHEEEEECCCEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC VPPAVARSFKVLIPVIIITILFSVINYLITLIAPEGLNDLVYTVIQAPLKDMGTNVFSVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHH IIGLVSNLLWVLGIHGPNTVAAIRDTIFTEPNLDNLSYVAQHGSAWGAPYPATWAGLNDG HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC FANYGGSGMTLGLLIAIFIASRRADYRDIAKLSLAPGIFNINEPVIFGLPIVLNPIMVIP HHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCCEECCHHHHHHHHHHH FIITPAINTLIGYFFISTKLIPPVAYQVPWTTPGPLIPFLGTGGNWLALLVGLLCLAVAT HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VIYLPFVLVSNKIAASDAAMDKNATASTEQ HHHHHHHHHCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIMSKFEHGMERVLVPVANKLNSQRHIAAIRDAFILVFPLIMAGSIITLINFAVLSPDG CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FIAKILFLGKIFPNLADAQAVFSPVMQGSTNIMAILIVFLVARNLAIFFKQDDLLCGLTS HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHH IGAFFIVYTPYTVVDNASYMTIKFLGAQGLFVAIIVAIITGEVFSRLARSPRLMIKMPDQ HHHEEEEECCCEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC VPPAVARSFKVLIPVIIITILFSVINYLITLIAPEGLNDLVYTVIQAPLKDMGTNVFSVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHH IIGLVSNLLWVLGIHGPNTVAAIRDTIFTEPNLDNLSYVAQHGSAWGAPYPATWAGLNDG HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC FANYGGSGMTLGLLIAIFIASRRADYRDIAKLSLAPGIFNINEPVIFGLPIVLNPIMVIP HHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCCEECCHHHHHHHHHHH FIITPAINTLIGYFFISTKLIPPVAYQVPWTTPGPLIPFLGTGGNWLALLVGLLCLAVAT HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VIYLPFVLVSNKIAASDAAMDKNATASTEQ HHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: diacetylchitobiose [Periplasm]; phosphoenolpyruvate; cellobiose [Periplasm] [C]
Specific reaction: phosphoenolpyruvate + diacetylchitobiose [Periplasm] = pyruvate + diacetylchitobiose-6-phosphate [Cytoplasm] phosphoenolpyruvate + cellobiose [Periplasm] = cellobiose-6-phosphate [Cytoplasm] + pyruvate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2179047; 9097039; 9278503; 2092358; 9405618; 10913117 [H]