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The map label for this gene is yccR [C]

Identifier: 226225297

GI number: 226225297

Start: 2791632

End: 2791883

Strand: Reverse

Name: yccR [C]

Synonym: Lm4b_02720

Alternate gene names: 226225297

Gene position: 2791883-2791632 (Counterclockwise)

Preceding gene: 226225298

Following gene: 226225295

Centisome position: 95.85

GC content: 40.87

Gene sequence:

>252_bases
ATGGCGAACCTTAGCGAATTACCAAACATTGGCAAAGTACTGGAGCAGGATTTAATCAAAGCGGGAATAAAAACTCCCGT
CGAGCTAAAAGATGTTGGAAGCAAAGAAGCCTTTTTACGTATTTGGGAAAATGATTCAAGCGTTTGTCTAAGTGAACTAT
ATGCGCTTGAGGGAGCCGTTCAAGGCATCAGGTGGCATGGTTTAGACGAAGCAAAGAAAATCGAACTCAAAAAGTTTCAT
CAATCCTTATAG

Upstream 100 bases:

>100_bases
GATGCAGATGGTTCTGTACGCATTCCGAAAGTATTGCAAGGCTACATGGGCGGTATCGAGAAAATAGAATTACCAAAATA
ATATGGAAGAAGGAACTGTA

Downstream 100 bases:

>100_bases
AAAAAGCGACGATGCATATTCGCATCGTCGTTTTTTTATTTCCCGGGAAATAGTTATTTTAATTGTTGTTCTGCAAAGGA
AGCGTAAAGTGGATGGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: TfoX Domain-Containing Protein; Tfox DomaiN-Containing Protein; TfoX C-Terminal Domain-Containing Protein; TfoX C- Domain Superfamily

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCLSELYALEGAVQGIRWHGLDEAKKIELKKFH
QSL

Sequences:

>Translated_83_residues
MANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCLSELYALEGAVQGIRWHGLDEAKKIELKKFH
QSL
>Mature_82_residues
ANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCLSELYALEGAVQGIRWHGLDEAKKIELKKFHQ
SL

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9291; Mature: 9160

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCLSELYALEGAV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
QGIRWHGLDEAKKIELKKFHQSL
HCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCLSELYALEGAV
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
QGIRWHGLDEAKKIELKKFHQSL
HCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA