| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is mngB [H]
Identifier: 226225285
GI number: 226225285
Start: 2777450
End: 2780098
Strand: Direct
Name: mngB [H]
Synonym: Lm4b_02708
Alternate gene names: 226225285
Gene position: 2777450-2780098 (Clockwise)
Preceding gene: 226225284
Following gene: 226225286
Centisome position: 95.36
GC content: 38.43
Gene sequence:
>2649_bases ATGAAAAAAAATAAAATTGTACATGTTGTCGCACATTCCCACTGGGATCACGAATGGTATTTCACCATGGAAGATTCCAA TATCTTATTAATTGAGAATTTAGACTATCTTTTAAATGTTTTAGAAACAAAAGATTCCTTTGCAAGTTATTCCTTTGATG GTCAAATGTCTGTCATTGAGCGTTACTTAGATATTCGTCCAGAAAATAAAGCGCGCGTTGAAAAACTTATCCAAGATCGT CGTCTGTTCGTCGGTCCGTGGTATACACAAACCGATAGCTTGTTAGTTAAAACAGAAGCTGTGATTCGCAACTTACTTTA TGGTTATAAAATGGGCGAAGAATTCGGCCATAGCATGAGTATCGGTTATTCCCCAGATATTTTTGGGCAACATGCTTATC TGCCAGCTATTTATAAATCATTTAATATGGAGCATAGCATTTTCCAGCGTGGTGTTTATAACGATCAAGTGCAAGATGAC CTTAACTTCCACTGGACATCTCCAGACAACAAGTCCATCCCAACCAACAATATTTTCTTCGGTTATGGACCCGGCAAATT TTTAAGCAGTGAAAAAAGCTATGTAGAAACGCGTCTTCTGCCAATTTTAGATCGACTTGCTGAAATGAACACACATACAG ATGTCCTTCTTTTACCAGCAGGCGGCGACCAAGTACTTGTGCGCGAAAACTTCCCAGAAATTGTCGCGGAATTGAACGAG ATGGACTTAGGTTATACCTTCATTCTGTCCGATTACGAAGCATTTATGAATGATGCTTGGACTTCTACTTTCCCGAACGA AATCACTGGTGAACTGCTTGCTTGCCAAAAATCACGAATCCACCATACATGTCGTTCAGAACGCTACGATATTAAACGTC TTAATTACTTAGTAGAAAATAGATTAGTCAACATTCTAGAACCACTTGCAACAATGGCCAATAAATTCGGAATCAAATAT CCTAAACCTTGGTTAGATATTATTTGGAAAAAATTATTTGATAGCCACGCTCATAACGGTATTGGTGCTTCAAATTCAGA TGACGCAAACCATGACATCGTAGTTCGGCTAACTAGCGCACTTCGGATGACAGATGGCTTAATTAACCTTTTGAAAAAAC AAATTACGAAGGCCGTTAGTCAGGAAATGGGCGACGAAAATATTGCACTATTATTCAATACTAACCCAGTGGCAGAAGAA AGAACTGCAAAACTAACATTATTCACTCCTGAAAAATCATTCCAACTGTTCTCAGGTGATGCGGAAGTGACTTTCAGCGT TGTACATCAAGAAAAATTAGACGGTGGACGGAAAGTAATCGTAACTGCAAAAGGCGAAAAAGAAGTTGCTGTTCCTGATT ATTATCGTACAGAAATCTACTTGAAAAGCGGCCTAATCCCTGCACTTGGTTACAAAACATTGCAAGTGAAAGCCGTTACT ACAGAAATGGACCAATTAATCAGCATTTCCAAACAAACAATTGAAAATGAAAAAATCATTGTTCAATTCGAAAACGGGAA AATCAATCTTTTAAATAAAGAACAACAAAGCATTATAAATGACCTTATTCGCTTCGAAAATGTGGCTGACGCTGGGGATT CTTTTGACTTCTCACCACTTGAAGGCGACCAAGCCATCTATATCGAAACAAGCGAATTACTAACCGTTGAAAAAAATCAT CTATATAGCAAAATGATGTTAAAACATACTGCTTTAGTTCCGAAAGATTTAGAAGCCCGCGCACAAAAAACAAGTACAGA AACATTTGAAATTTTAACAGAAATCGAACTTTTTGACGGTGAAGAATTCGTCCGTGTTCGCCATACTATTGACAATAAAG TAAAAGACCACCGCATTAGAGCATTGATCAAAACAAATGTAGCAGAACCTAAATATTCTTACGCAGACCAAGGTTATAGC CTCATGAAACGCAGCGTCATAAACCCTTACCTTGCAAATTGGCGCGAGGACAAATTCGTGGAAGCACCTGTGCCGATTTT CCCAGTGGAAAATATCGTCGCTGTTTCTGAAGAAGACGCAACACTTGCCTTGTTAGTTGGCGGTATCAAAGAATATGAAA TCTTACCGAAAACTGCTGAAATCGCATTAACTCTTTTCAGAAGTAATGGTTTGCTTGGAAAAGATGATCTCATGTGGCGT CCAGGTCGTGCTTCCGGTATTAATAACAAAGTCGTTCCTACACCAGACGGTCAAATGCTCGAAGAAATGATTTTTGAATA TGCTGTGTACGTACAACCTGAGAAACTAAATGAACAAACGCTCTACGCGCAATCTAACATTTTTGAAGGTCATACAGAAA CCTATCACTTACAAAACCTAAATACATTTGAAGAGCGCCTAGAACGTTTTGAAGTAGATTATCCAATCGACCGTTTACCA GCTCAAAATTCTATCTTTGAATTAGATAACCCGAACGTATTCATGAGCACTTGCAAAAAATCGTGGGATGGCACTGGCAC AATTATCCGCCTATTTAACCCATCAGACAAAGAAGAAACCGTTCGCTGGACAACCAACGCTTCCAGTTTTGAAGTTTCAC TAGCGGAGGAAAAAATCGCAGAACTAAAAGAAAACACTATCTGTATTCCTAAAAAAGGATTTGCAACTATTTTGTTGGAA GGAGAATAA
Upstream 100 bases:
>100_bases CTACGGCTTAATCACACGTAAAGAAAATAAAATCAAATAAAAAAATAGGCTGACAGGTACTCTCGTTAGTACCTGTCACT TAATTTGAGAGGTTTTTAAA
Downstream 100 bases:
>100_bases TATGCAAACCGAACTGGTTAATCAAATAGAAGTAAAACTAAGAAAAATTTATCAAGCTGCATACCAACCCGCATACTTGG AAAAAATGCTCGCATGCGCC
Product: sugar hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 882; Mature: 882
Protein sequence:
>882_residues MKKNKIVHVVAHSHWDHEWYFTMEDSNILLIENLDYLLNVLETKDSFASYSFDGQMSVIERYLDIRPENKARVEKLIQDR RLFVGPWYTQTDSLLVKTEAVIRNLLYGYKMGEEFGHSMSIGYSPDIFGQHAYLPAIYKSFNMEHSIFQRGVYNDQVQDD LNFHWTSPDNKSIPTNNIFFGYGPGKFLSSEKSYVETRLLPILDRLAEMNTHTDVLLLPAGGDQVLVRENFPEIVAELNE MDLGYTFILSDYEAFMNDAWTSTFPNEITGELLACQKSRIHHTCRSERYDIKRLNYLVENRLVNILEPLATMANKFGIKY PKPWLDIIWKKLFDSHAHNGIGASNSDDANHDIVVRLTSALRMTDGLINLLKKQITKAVSQEMGDENIALLFNTNPVAEE RTAKLTLFTPEKSFQLFSGDAEVTFSVVHQEKLDGGRKVIVTAKGEKEVAVPDYYRTEIYLKSGLIPALGYKTLQVKAVT TEMDQLISISKQTIENEKIIVQFENGKINLLNKEQQSIINDLIRFENVADAGDSFDFSPLEGDQAIYIETSELLTVEKNH LYSKMMLKHTALVPKDLEARAQKTSTETFEILTEIELFDGEEFVRVRHTIDNKVKDHRIRALIKTNVAEPKYSYADQGYS LMKRSVINPYLANWREDKFVEAPVPIFPVENIVAVSEEDATLALLVGGIKEYEILPKTAEIALTLFRSNGLLGKDDLMWR PGRASGINNKVVPTPDGQMLEEMIFEYAVYVQPEKLNEQTLYAQSNIFEGHTETYHLQNLNTFEERLERFEVDYPIDRLP AQNSIFELDNPNVFMSTCKKSWDGTGTIIRLFNPSDKEETVRWTTNASSFEVSLAEEKIAELKENTICIPKKGFATILLE GE
Sequences:
>Translated_882_residues MKKNKIVHVVAHSHWDHEWYFTMEDSNILLIENLDYLLNVLETKDSFASYSFDGQMSVIERYLDIRPENKARVEKLIQDR RLFVGPWYTQTDSLLVKTEAVIRNLLYGYKMGEEFGHSMSIGYSPDIFGQHAYLPAIYKSFNMEHSIFQRGVYNDQVQDD LNFHWTSPDNKSIPTNNIFFGYGPGKFLSSEKSYVETRLLPILDRLAEMNTHTDVLLLPAGGDQVLVRENFPEIVAELNE MDLGYTFILSDYEAFMNDAWTSTFPNEITGELLACQKSRIHHTCRSERYDIKRLNYLVENRLVNILEPLATMANKFGIKY PKPWLDIIWKKLFDSHAHNGIGASNSDDANHDIVVRLTSALRMTDGLINLLKKQITKAVSQEMGDENIALLFNTNPVAEE RTAKLTLFTPEKSFQLFSGDAEVTFSVVHQEKLDGGRKVIVTAKGEKEVAVPDYYRTEIYLKSGLIPALGYKTLQVKAVT TEMDQLISISKQTIENEKIIVQFENGKINLLNKEQQSIINDLIRFENVADAGDSFDFSPLEGDQAIYIETSELLTVEKNH LYSKMMLKHTALVPKDLEARAQKTSTETFEILTEIELFDGEEFVRVRHTIDNKVKDHRIRALIKTNVAEPKYSYADQGYS LMKRSVINPYLANWREDKFVEAPVPIFPVENIVAVSEEDATLALLVGGIKEYEILPKTAEIALTLFRSNGLLGKDDLMWR PGRASGINNKVVPTPDGQMLEEMIFEYAVYVQPEKLNEQTLYAQSNIFEGHTETYHLQNLNTFEERLERFEVDYPIDRLP AQNSIFELDNPNVFMSTCKKSWDGTGTIIRLFNPSDKEETVRWTTNASSFEVSLAEEKIAELKENTICIPKKGFATILLE GE >Mature_882_residues MKKNKIVHVVAHSHWDHEWYFTMEDSNILLIENLDYLLNVLETKDSFASYSFDGQMSVIERYLDIRPENKARVEKLIQDR RLFVGPWYTQTDSLLVKTEAVIRNLLYGYKMGEEFGHSMSIGYSPDIFGQHAYLPAIYKSFNMEHSIFQRGVYNDQVQDD LNFHWTSPDNKSIPTNNIFFGYGPGKFLSSEKSYVETRLLPILDRLAEMNTHTDVLLLPAGGDQVLVRENFPEIVAELNE MDLGYTFILSDYEAFMNDAWTSTFPNEITGELLACQKSRIHHTCRSERYDIKRLNYLVENRLVNILEPLATMANKFGIKY PKPWLDIIWKKLFDSHAHNGIGASNSDDANHDIVVRLTSALRMTDGLINLLKKQITKAVSQEMGDENIALLFNTNPVAEE RTAKLTLFTPEKSFQLFSGDAEVTFSVVHQEKLDGGRKVIVTAKGEKEVAVPDYYRTEIYLKSGLIPALGYKTLQVKAVT TEMDQLISISKQTIENEKIIVQFENGKINLLNKEQQSIINDLIRFENVADAGDSFDFSPLEGDQAIYIETSELLTVEKNH LYSKMMLKHTALVPKDLEARAQKTSTETFEILTEIELFDGEEFVRVRHTIDNKVKDHRIRALIKTNVAEPKYSYADQGYS LMKRSVINPYLANWREDKFVEAPVPIFPVENIVAVSEEDATLALLVGGIKEYEILPKTAEIALTLFRSNGLLGKDDLMWR PGRASGINNKVVPTPDGQMLEEMIFEYAVYVQPEKLNEQTLYAQSNIFEGHTETYHLQNLNTFEERLERFEVDYPIDRLP AQNSIFELDNPNVFMSTCKKSWDGTGTIIRLFNPSDKEETVRWTTNASSFEVSLAEEKIAELKENTICIPKKGFATILLE GE
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Escherichia coli, GI1786952, Length=874, Percent_Identity=29.5194508009153, Blast_Score=400, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 100966; Mature: 100966
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKIVHVVAHSHWDHEWYFTMEDSNILLIENLDYLLNVLETKDSFASYSFDGQMSVIE CCCCEEEEEEEECCCCCEEEEEECCCCEEEEECHHHHHHHHHCCHHHHCCCCCCHHHHHH RYLDIRPENKARVEKLIQDRRLFVGPWYTQTDSLLVKTEAVIRNLLYGYKMGEEFGHSMS HHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCHHHCCEEE IGYSPDIFGQHAYLPAIYKSFNMEHSIFQRGVYNDQVQDDLNFHWTSPDNKSIPTNNIFF CCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEE GYGPGKFLSSEKSYVETRLLPILDRLAEMNTHTDVLLLPAGGDQVLVRENFPEIVAELNE ECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCHHHHHHHHH MDLGYTFILSDYEAFMNDAWTSTFPNEITGELLACQKSRIHHTCRSERYDIKRLNYLVEN CCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RLVNILEPLATMANKFGIKYPKPWLDIIWKKLFDSHAHNGIGASNSDDANHDIVVRLTSA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHH LRMTDGLINLLKKQITKAVSQEMGDENIALLFNTNPVAEERTAKLTLFTPEKSFQLFSGD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEECCC AEVTFSVVHQEKLDGGRKVIVTAKGEKEVAVPDYYRTEIYLKSGLIPALGYKTLQVKAVT CEEEEEEEEHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCHHCCCEEEEEEEEH TEMDQLISISKQTIENEKIIVQFENGKINLLNKEQQSIINDLIRFENVADAGDSFDFSPL HHHHHHHHHHHHHCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCC EGDQAIYIETSELLTVEKNHLYSKMMLKHTALVPKDLEARAQKTSTETFEILTEIELFDG CCCCEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHEEEECC EEFVRVRHTIDNKVKDHRIRALIKTNVAEPKYSYADQGYSLMKRSVINPYLANWREDKFV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCCHHHHCCCCCCEE EAPVPIFPVENIVAVSEEDATLALLVGGIKEYEILPKTAEIALTLFRSNGLLGKDDLMWR ECCCCCCCCCCEEEECCCCCEEEEEECCCHHEEECCCHHHEEEEEEECCCCCCCCCCEEC PGRASGINNKVVPTPDGQMLEEMIFEYAVYVQPEKLNEQTLYAQSNIFEGHTETYHLQNL CCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECHHHCCCCEEEECCCCCCCCCCEEEECCC NTFEERLERFEVDYPIDRLPAQNSIFELDNPNVFMSTCKKSWDGTGTIIRLFNPSDKEET CHHHHHHHHCCCCCCHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCE VRWTTNASSFEVSLAEEKIAELKENTICIPKKGFATILLEGE EEEEECCCCEEEEHHHHHHHHHHHCEEEEECCCCEEEEEECC >Mature Secondary Structure MKKNKIVHVVAHSHWDHEWYFTMEDSNILLIENLDYLLNVLETKDSFASYSFDGQMSVIE CCCCEEEEEEEECCCCCEEEEEECCCCEEEEECHHHHHHHHHCCHHHHCCCCCCHHHHHH RYLDIRPENKARVEKLIQDRRLFVGPWYTQTDSLLVKTEAVIRNLLYGYKMGEEFGHSMS HHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCHHHCCEEE IGYSPDIFGQHAYLPAIYKSFNMEHSIFQRGVYNDQVQDDLNFHWTSPDNKSIPTNNIFF CCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEE GYGPGKFLSSEKSYVETRLLPILDRLAEMNTHTDVLLLPAGGDQVLVRENFPEIVAELNE ECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCHHHHHHHHH MDLGYTFILSDYEAFMNDAWTSTFPNEITGELLACQKSRIHHTCRSERYDIKRLNYLVEN CCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RLVNILEPLATMANKFGIKYPKPWLDIIWKKLFDSHAHNGIGASNSDDANHDIVVRLTSA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHH LRMTDGLINLLKKQITKAVSQEMGDENIALLFNTNPVAEERTAKLTLFTPEKSFQLFSGD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEECCC AEVTFSVVHQEKLDGGRKVIVTAKGEKEVAVPDYYRTEIYLKSGLIPALGYKTLQVKAVT CEEEEEEEEHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCHHCCCEEEEEEEEH TEMDQLISISKQTIENEKIIVQFENGKINLLNKEQQSIINDLIRFENVADAGDSFDFSPL HHHHHHHHHHHHHCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCC EGDQAIYIETSELLTVEKNHLYSKMMLKHTALVPKDLEARAQKTSTETFEILTEIELFDG CCCCEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHEEEECC EEFVRVRHTIDNKVKDHRIRALIKTNVAEPKYSYADQGYSLMKRSVINPYLANWREDKFV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCCHHHHCCCCCCEE EAPVPIFPVENIVAVSEEDATLALLVGGIKEYEILPKTAEIALTLFRSNGLLGKDDLMWR ECCCCCCCCCCEEEECCCCCEEEEEECCCHHEEECCCHHHEEEEEEECCCCCCCCCCEEC PGRASGINNKVVPTPDGQMLEEMIFEYAVYVQPEKLNEQTLYAQSNIFEGHTETYHLQNL CCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECHHHCCCCEEEECCCCCCCCCCEEEECCC NTFEERLERFEVDYPIDRLPAQNSIFELDNPNVFMSTCKKSWDGTGTIIRLFNPSDKEET CHHHHHHHHCCCCCCHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCE VRWTTNASSFEVSLAEEKIAELKENTICIPKKGFATILLEGE EEEEECCCCEEEEHHHHHHHHHHHCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9063979 [H]