Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is gatA [C]

Identifier: 226225218

GI number: 226225218

Start: 2711655

End: 2712119

Strand: Reverse

Name: gatA [C]

Synonym: Lm4b_02640

Alternate gene names: 226225218

Gene position: 2712119-2711655 (Counterclockwise)

Preceding gene: 226225219

Following gene: 226225217

Centisome position: 93.11

GC content: 40.65

Gene sequence:

>465_bases
ATGGATTTAGTACAATTTTTGAAAAAAGGAATGGTTTGGGTTCAATCGGATATCGAGAAACAAGAGGACCTATTCCAAAT
GGTCGCAGAAAGTGGAAAGTCTGAAGGATATGTAACGGATGACTTTTTAACAAGACTAACAGACCGTGAACAAACCTTTC
CAACGGGGCTAAAATTAGATGGATACGGCGTGGCATTACCGCACACGGATCCAGAATGCGTTACGGAACAATTTATCGCC
GTAATCACTGTGAAAGATGGCATTCCATTTAAATTAATGGAAGATGCTGGTCAAACGGTTGAAGCGAATTTGATTTTCGT
ACTCGGACTAAATGAACCTCACAGCCAGCTCGCGGTACTTCAGCAATTGATGGGGACGATTCAGGATAAAGACAATGTAG
CCGCATTACTCAGAGCGAAAGATGAAGACGAAGTAAAACAAATTTTAGAAACTATTACCGTTTAA

Upstream 100 bases:

>100_bases
GAACACAGAAGAAATGCACCAAATAATTAAAAACTTCACGGACTTGGAAACAAAAAAGACAATGTAGAGAAGTCAGAAAG
AATTACAGGAGGATTTCGTA

Downstream 100 bases:

>100_bases
AAAAAACAGGAAAATTAGCCGCGGGAAATCGCAGCAATTAATTAGGAGGAATTTATCATGGGACAATTTAAAATTTTGGT
AGCTTGTGGAGCAGGAATTG

Product: PTS system galactitol-specific enzyme IIA component

Products: protein histidine; sugar phosphate

Alternate protein names: PTS System Galactitol-Specific Transporter Subunit IIA; PTS System Galactitol-Specific IIA Component; PTS System Protein; PTS System IIA Component; PTS System Galactitol-Specific II A Component; PTS System Galactitol-Specific IIA Component; PTS Family Fructose/Mannitol Porter Component IIA; Galactitol PTS EIIA; PTS System Fructose-Specific II BC Component; PTS System IIBC Component; PTS Fructose-Specific IIA Component; PTS System Fructose-Specific EIIBC Component; PTS System Galactitol-Specific Component; PTS System Galacitol-Specific Transporter Subunit IIA; PTS System; Galactitol PTS; Pts System Galactitol-Specific Transporter Subunit IIa; PTS System Galactitol Specific IIA Component; PTS System Transporter Subunit IIBC; PTS System Transporter Subunit IIA; PTS System Mannitol-Specific Eiicba Component; Phosphotransferase System; PTS IIA-Like Protein Nitrogen-Regulatory Protein PtsN; PTS System IIa Component

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIA
VITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETITV

Sequences:

>Translated_154_residues
MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIA
VITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETITV
>Mature_154_residues
MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIA
VITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETITV

Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.69

Molecular weight: Translated: 17201; Mature: 17201

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS51094 PTS_EIIA_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLD
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEC
GYGVALPHTDPECVTEQFIAVITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVL
CCEEECCCCCHHHHHHHHEEEEEECCCCCCHHHHHCCCEEECEEEEEEECCCCHHHHHHH
QQLMGTIQDKDNVAALLRAKDEDEVKQILETITV
HHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLTRLTDREQTFPTGLKLD
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEC
GYGVALPHTDPECVTEQFIAVITVKDGIPFKLMEDAGQTVEANLIFVLGLNEPHSQLAVL
CCEEECCCCCHHHHHHHHEEEEEECCCCCCHHHHHCCCEEECEEEEEEECCCCHHHHHHH
QQLMGTIQDKDNVAALLRAKDEDEVKQILETITV
HHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N(pi)-phosphohistidine; sugar

Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA